RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 CEBPDP49716 269 aaPredicted RBP16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 RNFT1Q5M7Z0 435 aa16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 ZNF664Q8N3J9 261 aa16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 HSPB7Q9UBY9 170 aa16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 TRGV5A0A0B4J1U4 118 aa16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 J3QW42 95 aa16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 GRPP07492 148 aa16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 CD46P15529 392 aa16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 SRP14P37108 136 aaKnown RBP16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 MRPL49Q13405 166 aaKnown RBP16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 P2RY6Q15077 328 aa16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 OR2T10Q8NGZ9 312 aa16.56■□□□□ 0.24
NKX2-1-202ENST00000498187 HMGB3O15347 200 aaKnown RBP16.55■□□□□ 0.24
NKX2-1-202ENST00000498187 ST8SIA5O15466 376 aa16.55■□□□□ 0.24
NKX2-1-202ENST00000498187 VENTXO95231 258 aa16.55■□□□□ 0.24
NKX2-1-202ENST00000498187 COX5AP20674 150 aa16.55■□□□□ 0.24
NKX2-1-202ENST00000498187 NUBP1P53384 320 aa16.55■□□□□ 0.24
NKX2-1-202ENST00000498187 BEND2Q8NDZ0 799 aa16.55■□□□□ 0.24
NKX2-1-202ENST00000498187 SLC25A40Q8TBP6 338 aa16.55■□□□□ 0.24
NKX2-1-202ENST00000498187 TMEM18Q96B42 140 aa16.55■□□□□ 0.24
NKX2-1-202ENST00000498187 FER1L6-AS2Q96M78 137 aa16.55■□□□□ 0.24
NKX2-1-202ENST00000498187 ZNF705GA8MUZ8 300 aaPredicted RBP16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 GGCTO75223 188 aaKnown RBP16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 NDUFB7P17568 137 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 SSX2Q16385 188 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 ACTL10Q5JWF8 245 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 PLA2G2CQ5R387 149 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 CISD2Q8N5K1 135 aaKnown RBP16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 NDUFAF3Q9BU61 184 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 KNTC1P50748 2209 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 DIDO1Q9BTC0 2240 aaKnown RBP16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 HAND1O96004 215 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 GYPAP02724 150 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 TYMSP04818 313 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 UBE2NP61088 152 aaKnown RBP16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 HNF4GQ14541 408 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 ATP1A1-AS1Q5TC04 95 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 KCNIP4Q6PIL6 250 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 ZBTB34Q8NCN2 500 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 OR10P1Q8NGE3 313 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 OR1L1Q8NH94 360 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 NEIL1Q96FI4 390 aaPredicted RBP16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 ELOVL1Q9BW60 279 aa16.54■□□□□ 0.24
NKX2-1-202ENST00000498187 PSPNO60542 156 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 CD59P13987 128 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 RTP5Q14D33 572 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 FFAR4Q5NUL3 377 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 TMEM37Q8WXS4 190 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 MISP3Q96FF7 219 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 KCNIP1Q9NZI2 227 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 FUT9Q9Y231 359 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 TP53TG5Q9Y2B4 290 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 GTF3C1Q12789 2109 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 RAMP3O60896 148 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 CCKARP32238 428 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 PSG7Q13046 419 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 ZNF709Q8N972 641 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 OR6C3Q9NZP0 311 aa16.53■□□□□ 0.24
NKX2-1-202ENST00000498187 LYZL6O75951 148 aa16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 TNFSF15O95150 251 aa16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 RAC2P15153 192 aa16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 IGHV1-2P23083 117 aa16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 OR3A1P47881 315 aa16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 TLE1Q04724 770 aa16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 USF2Q15853 346 aaPredicted RBP16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 CLEC12BQ2HXU8 276 aa16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 ZNF766Q5HY98 468 aa16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 FAM53AQ6NSI3 398 aaPredicted RBP16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 ZNF645Q8N7E2 425 aa16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 OR2D2Q9H210 308 aa16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 GPR179Q6PRD1 2367 aa16.52■□□□□ 0.24
NKX2-1-202ENST00000498187 LRRC30A6NM36 301 aa16.52■□□□□ 0.23
NKX2-1-202ENST00000498187 IQCF6A8MYZ5 107 aa16.52■□□□□ 0.23
NKX2-1-202ENST00000498187 LCN2P80188 198 aa16.52■□□□□ 0.23
NKX2-1-202ENST00000498187 GABRA6Q16445 453 aa16.52■□□□□ 0.23
NKX2-1-202ENST00000498187 GATAD1Q8WUU5 269 aa16.52■□□□□ 0.23
NKX2-1-202ENST00000498187 GMPPAQ96IJ6 420 aaPredicted RBP16.52■□□□□ 0.23
NKX2-1-202ENST00000498187 LURAP1Q96LR2 239 aa16.52■□□□□ 0.23
NKX2-1-202ENST00000498187 TMEM30CPA0ZSE6 113 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 PAGE4O60829 102 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 KRASP01116 189 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 G6PCP35575 357 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 ARG2P78540 354 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 DHRS13Q6UX07 377 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 GCNT2Q8N0V5 402 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 ZNF808Q8N4W9 903 aaPredicted RBP16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 GALMQ96C23 342 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 C5orf30Q96GV9 206 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 BTF3L4Q96K17 158 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 CIB3Q96Q77 187 aaPredicted RBP16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 MRPL37Q9BZE1 423 aaKnown RBP16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 C12orf77C9JDV5 145 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 MPV17P39210 176 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 RPL30P62888 115 aaKnown RBP16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 HOXA4Q00056 320 aaPredicted RBP16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 TGFBR3Q03167 851 aa16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 ZNF816Q0VGE8 651 aaPredicted RBP16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 CXorf67Q86X51 503 aaPredicted RBP16.51■□□□□ 0.23
NKX2-1-202ENST00000498187 DMRTC2Q8IXT2 367 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms