RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PYDC2Q56P42 97 aa12.13□□□□□ -0.47
NUP50-219ENST00000497960 C10orf99Q6UWK7 81 aa12.13□□□□□ -0.47
NUP50-219ENST00000497960 ZNF329Q86UD4 541 aa12.13□□□□□ -0.47
NUP50-219ENST00000497960 OR5AP2Q8NGF4 316 aa12.13□□□□□ -0.47
NUP50-219ENST00000497960 OR5H2Q8NGV7 314 aa12.13□□□□□ -0.47
NUP50-219ENST00000497960 RASL11BQ9BPW5 248 aa12.13□□□□□ -0.47
NUP50-219ENST00000497960 EHFQ9NZC4 300 aa12.13□□□□□ -0.47
NUP50-219ENST00000497960 RBM7Q9Y580 266 aaKnown RBP12.13□□□□□ -0.47
NUP50-219ENST00000497960 RBBP9O75884 186 aa12.12□□□□□ -0.47
NUP50-219ENST00000497960 HLA-DMAP28067 261 aa12.12□□□□□ -0.47
NUP50-219ENST00000497960 LSAMPQ13449 338 aa12.12□□□□□ -0.47
NUP50-219ENST00000497960 H1FOOQ8IZA3 346 aaPredicted RBP12.12□□□□□ -0.47
NUP50-219ENST00000497960 Q8N9W7 124 aa12.12□□□□□ -0.47
NUP50-219ENST00000497960 NOL4LQ96MY1 436 aaPredicted RBP12.12□□□□□ -0.47
NUP50-219ENST00000497960 S1PR3Q99500 378 aa12.12□□□□□ -0.47
NUP50-219ENST00000497960 OR2D2Q9H210 308 aa12.12□□□□□ -0.47
NUP50-219ENST00000497960 IFI27L2Q9H2X8 130 aa12.12□□□□□ -0.47
NUP50-219ENST00000497960 KLK11Q9UBX7 282 aa12.12□□□□□ -0.47
NUP50-219ENST00000497960 SAA2-SAA4A0A096LPE2 208 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 G3V4G9 280 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 AP4M1O00189 453 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 ITGB1BP1O14713 200 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 PMP2P02689 132 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 PF4P02776 101 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 SAA2P0DJI9 122 aaPredicted RBP12.11□□□□□ -0.47
NUP50-219ENST00000497960 OR5H8P0DN80 308 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 NAT1P18440 290 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 NFYAP23511 347 aaPredicted RBP12.11□□□□□ -0.47
NUP50-219ENST00000497960 HRH1P35367 487 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 GPR12P47775 334 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 ACTBL2Q562R1 376 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 SAMD5Q5TGI4 173 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 STPG2Q8N412 459 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 COMMD1Q8N668 190 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 SOSTQ9BQB4 213 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 GON7Q9BXV9 100 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 MRPL20Q9BYC9 149 aaKnown RBP12.11□□□□□ -0.47
NUP50-219ENST00000497960 TOLLIPQ9H0E2 274 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 C11orf54Q9H0W9 315 aaPredicted RBP12.11□□□□□ -0.47
NUP50-219ENST00000497960 PLSCR3Q9NRY6 295 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 PIPOXQ9P0Z9 390 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 MTFP1Q9UDX5 166 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 ZNF221Q9UK13 617 aa12.11□□□□□ -0.47
NUP50-219ENST00000497960 J3QRK9 145 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 RAB29O14966 203 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 GSTZ1O43708 216 aaPredicted RBP12.1□□□□□ -0.47
NUP50-219ENST00000497960 CD33P20138 364 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 PTBP1P26599 531 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP50-219ENST00000497960 ETV6P41212 452 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 F2RL1P55085 397 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 SSBP1Q04837 148 aaKnown RBP12.1□□□□□ -0.47
NUP50-219ENST00000497960 MMDQ15546 238 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 ZNF79Q15937 498 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 FAM71F2Q6NXP2 309 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 ZNF833PQ6ZTB9 187 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 ODF3L1Q8IXM7 274 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 ABHD14BQ96IU4 210 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 NABP2Q9BQ15 211 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 OR2W1Q9Y3N9 320 aa12.1□□□□□ -0.47
NUP50-219ENST00000497960 M0QYG6 137 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 OR8U9P0C7N5 309 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 FCGR2CP31995 323 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 RFX2P48378 723 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 LUMP51884 338 aaPredicted RBP12.09□□□□□ -0.47
NUP50-219ENST00000497960 TAS2R19P59542 299 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 HERV-K104P61576 105 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 BEAN1Q3B7T3 259 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 RNASE10Q5GAN6 216 aaKnown RBP12.09□□□□□ -0.47
NUP50-219ENST00000497960 Q8N402 240 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 FAM71E2Q8N5Q1 922 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 OR8U1Q8NH10 309 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 ZNF251Q9BRH9 671 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 GHITMQ9H3K2 345 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 ZFP57Q9NU63 452 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 RNF150Q9ULK6 438 aa12.09□□□□□ -0.47
NUP50-219ENST00000497960 LINC01548A6NM66 108 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 CD3DP04234 171 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 TBPP20226 339 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 AADACP22760 399 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 FXYD4P59646 89 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 RPL23AP62750 156 aaKnown RBP12.08□□□□□ -0.48
NUP50-219ENST00000497960 DYRK1AQ13627 763 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 RPL39P5Q59GN2 51 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 OXLD1Q5BKU9 147 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 KPRPQ5T749 579 aaPredicted RBP12.08□□□□□ -0.48
NUP50-219ENST00000497960 TEX38Q6PEX7 206 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 OVCH2Q7RTZ1 564 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 TMEM17Q86X19 198 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 TMEM229BQ8NBD8 167 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 WFDC9Q8NEX5 89 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 ZNF2Q9BSG1 426 aaPredicted RBP12.08□□□□□ -0.48
NUP50-219ENST00000497960 SRRQ9GZT4 340 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 TAS2R8Q9NYW2 309 aa12.08□□□□□ -0.48
NUP50-219ENST00000497960 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
NUP50-219ENST00000497960 CMYA5Q8N3K9 4069 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 TUSC2O75896 110 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 PPYP01298 95 aa12.07□□□□□ -0.48
NUP50-219ENST00000497960 IFNA6P05013 189 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms