RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 ATP6V1FQ16864 119 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 HNRNPA1L2Q32P51 320 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 ABCA11PQ4W5N1 156 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 AKR1C8PQ5T2L2 129 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 ZNF684Q5T5D7 378 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 KDM4DQ6B0I6 523 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 GLYATQ6IB77 296 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 LCN8Q6JVE9 175 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 H3F3CQ6NXT2 135 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 SLC25A34Q6PIV7 304 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 TMEM205Q6UW68 189 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 CD300LGQ6UXG3 332 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 FAM151BQ6UXP7 276 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 FAM183BPQ6ZVS7 135 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 HIST2H3AQ71DI3 136 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 SSX7Q7RTT5 188 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 DEFB128Q7Z7B8 93 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 VTCN1Q7Z7D3 282 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 TMED4Q7Z7H5 227 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 TMEM150AQ86TG1 271 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 TMEM135Q86UB9 458 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 LRRC28Q86X40 367 aaPredicted RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 CALHM1Q8IU99 346 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 WDFY1Q8IWB7 410 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 CPNE9Q8IYJ1 553 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 C17orf78Q8N4C9 275 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 COMMD1Q8N668 190 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 ZNF645Q8N7E2 425 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 CLDN22Q8N7P3 220 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 DEFB124Q8NES8 71 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR5T3Q8NGG3 340 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR56A4Q8NGH8 313 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR4A15Q8NGL6 344 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR10G4Q8NGN3 311 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR2A1Q8NGT9 310 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR2T4Q8NH00 348 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR8U1Q8NH10 309 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR2V1Q8NHB1 315 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR5K1Q8NHB7 308 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR10J5Q8NHC4 309 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 UBALD1Q8TB05 177 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 FAM45AQ8TCE6 357 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 PIFOQ8TCI5 191 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 LKAAEAR1Q8TD35 194 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 C16orf78Q8WTQ4 265 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 ABHD3Q8WU67 409 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 ACOT12Q8WYK0 555 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 FRZBQ92765 325 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 TMEM230Q96A57 120 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 YIPF6Q96EC8 236 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 MALSU1Q96EH3 234 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 C14orf144Q96I85 54 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 ZNF514Q96K75 400 aaPredicted RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 HBEGFQ99075 208 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 EBNA1BP2Q99848 306 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 ACBD6Q9BR61 282 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 MARVELD1Q9BSK0 173 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 ZNF426Q9BUY5 554 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 UGT2B28Q9BY64 529 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 PCBD2Q9H0N5 130 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR51E2Q9H255 320 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 SYT4Q9H2B2 425 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 ISYNA1Q9NPH2 558 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 FBXO6Q9NRD1 293 aaPredicted RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 TREX1Q9NSU2 369 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 C14orf105Q9NVL8 296 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 RBFOX1Q9NWB1 397 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 FBXL12Q9NXK8 326 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 AHSPQ9NZD4 102 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 ADA2Q9NZK5 511 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 PDP1Q9P0J1 537 aaPredicted RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 NAGKQ9UJ70 344 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 TBC1D24Q9ULP9 559 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 SLC22A13Q9Y226 551 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 SLC17A4Q9Y2C5 497 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 CARHSP1Q9Y2V2 147 aaKnown RBP1.54□□□□□ -2.16
CBX3-208ENST00000497498 OR51B4Q9Y5P0 310 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 PTPRBP23467 1997 aa1.54□□□□□ -2.16
CBX3-208ENST00000497498 STAB2Q8WWQ8 2551 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 A0A087X0T9 212 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 TRAV19A0A0A6YYK7 116 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 A0A0D9SG52 128 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 IGHV5-10-1A0A0J9YXX1 117 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 SPAARA0A1B0GVQ0 90 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 TMEM72A0PK05 275 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 IRGMA1A4Y4 181 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 C20orf202A1L168 122 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 C7orf66A4D0T2 115 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 NAP1L6A6NFF2 107 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 COLCA2A8K830 154 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 GABRR3A8MPY1 467 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 LYRM9A8MSI8 78 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 HMSDA8MTL9 139 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 SUPT3HB4E1H0 165 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 TMEM238C9JI98 176 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 PPP5D1E7EU14 171 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 E7EWF7 191 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 INMT-MINDY4F8WBC2 141 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 TNFRSF11BO00300 401 aa1.53□□□□□ -2.16
CBX3-208ENST00000497498 PLPP1O14494 284 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms