RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 LCN6P62502 163 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 MRPS34P82930 218 aaKnown RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 FAM3AP98173 230 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 PNRC1Q12796 327 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 GGTLC2Q14390 218 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 RAB35Q15286 201 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TWIST1Q15672 202 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ADIPOQQ15848 244 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 RAB11BQ15907 218 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TMEM183BQ1AE95 376 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 MAJINQ3KP22 176 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 Q499Y3 187 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TP53I3Q53FA7 332 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 C1orf194Q5T5A4 169 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 NCR3LG1Q68D85 454 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SLC25A24Q6NUK1 477 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF774Q6NX45 483 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SLC35F2Q8IXU6 374 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 FBXL14Q8N1E6 418 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF664Q8N3J9 261 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 PAQR4Q8N4S7 273 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SLC35G3Q8N808 338 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 NKAIN3Q8N8D7 197 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 NUP37Q8NFH4 326 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 OR8U1Q8NH10 309 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 LYPD6BQ8NI32 183 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 GPX8Q8TED1 209 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ABHD5Q8WTS1 349 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 RASD2Q96D21 266 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TVP23CQ96ET8 276 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SEC22AQ96IW7 307 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 FAM210BQ96KR6 192 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 TECTBQ96PL2 329 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ALG12Q9BV10 488 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 SLC5A7Q9GZV3 580 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 OR52D1Q9H346 318 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF442Q9H7R0 627 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 IL20RAQ9UHF4 553 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ZFP30Q9Y2G7 519 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 LRP12Q9Y561 859 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 HIVEP1P15822 2718 aa4.12□□□□□ -1.75
CSMD3-208ENST00000497026 ACANP16112 2415 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 TRAV18A0A075B6X5 111 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 A0A096LNT2 108 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 C13orf42A0A1B0GVH6 325 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 A6NIZ1 184 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 K7EP13 123 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 LY6HO94772 140 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 NXPH2O95156 264 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 NDUFB8O95169 186 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 NDUFB2O95178 105 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 TACC2O95359 2948 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 TOMM40O96008 361 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 PNPP00491 289 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 PRH1P02810 166 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 OPN1MWP04001 364 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 TACSTD2P09758 323 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 OR4A8P0C604 315 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 SEC11BP0C7V7 166 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 TRGC1P0CF51 173 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 OPN1MW2P0DN77 364 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 OPN1MW3P0DN78 364 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 CCL2P13500 99 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF32P17041 273 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 SLC6A6P31641 620 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 THBS3P49746 956 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 FABP6P51161 128 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 UCP2P55851 309 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 OR12D2P58182 307 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 RBX1P62877 108 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 PAX5Q02548 391 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 PPP1R1AQ13522 171 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 ENDOGQ14249 297 aaKnown RBP4.11□□□□□ -1.75
CSMD3-208ENST00000497026 ITPR3Q14573 2671 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 HERPUD1Q15011 391 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 ELOBQ15370 118 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 EFNB3Q15768 340 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 ATP6V1FQ16864 119 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 CLEC12BQ2HXU8 276 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 ACOT6Q3I5F7 207 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-208ENST00000497026 TMEM268Q5VZI3 342 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 OTPQ5XKR4 325 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 DEGS2Q6QHC5 323 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF705AQ6ZN79 300 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-208ENST00000497026 C9orf47Q6ZRZ4 202 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 SLC25A26Q70HW3 274 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 KCTD9Q7L273 389 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 SLC35E3Q7Z769 313 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 BIVMQ86UB2 503 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 ZSCAN4Q8NAM6 433 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-208ENST00000497026 SLC26A10Q8NG04 563 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 OR8S1Q8NH09 359 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 RPS4Y2Q8TD47 263 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 GPR148Q8TDV2 347 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 CASTOR1Q8WTX7 329 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 Q8WTZ3 238 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 SMIM12Q96EX1 92 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 PELI1Q96FA3 418 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 C18orf12Q96KH6 178 aa4.11□□□□□ -1.75
CSMD3-208ENST00000497026 NIPSNAP3BQ9BS92 247 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms