RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 CBX3Q13185 183 aa13.35□□□□□ -0.27
COMMD3-214ENST00000496071 TMEM65Q6PI78 240 aa13.35□□□□□ -0.27
COMMD3-214ENST00000496071 ETV3LQ6ZN32 361 aa13.35□□□□□ -0.27
COMMD3-214ENST00000496071 C18orf65Q6ZTR6 163 aa13.35□□□□□ -0.27
COMMD3-214ENST00000496071 MRPL41Q8IXM3 137 aaKnown RBP13.35□□□□□ -0.27
COMMD3-214ENST00000496071 OR5H6Q8NGV6 325 aa13.35□□□□□ -0.27
COMMD3-214ENST00000496071 GPR61Q9BZJ8 451 aa13.35□□□□□ -0.27
COMMD3-214ENST00000496071 DIABLOQ9NR28 239 aa13.35□□□□□ -0.27
COMMD3-214ENST00000496071 SLC35D1Q9NTN3 355 aa13.35□□□□□ -0.27
COMMD3-214ENST00000496071 NECAP2Q9NVZ3 263 aa13.35□□□□□ -0.27
COMMD3-214ENST00000496071 METTL1Q9UBP6 276 aaKnown RBP13.35□□□□□ -0.27
COMMD3-214ENST00000496071 SPATA2Q9UM82 520 aa13.35□□□□□ -0.27
COMMD3-214ENST00000496071 WSB1Q9Y6I7 421 aa13.35□□□□□ -0.27
COMMD3-214ENST00000496071 RRASP10301 218 aa13.34□□□□□ -0.27
COMMD3-214ENST00000496071 LGALS7P47929 136 aa13.34□□□□□ -0.27
COMMD3-214ENST00000496071 CRIP2P52943 208 aaPredicted RBP13.34□□□□□ -0.27
COMMD3-214ENST00000496071 LINC00205P59089 165 aa13.34□□□□□ -0.27
COMMD3-214ENST00000496071 CX3CL1P78423 397 aa13.34□□□□□ -0.27
COMMD3-214ENST00000496071 PSG5Q15238 335 aa13.34□□□□□ -0.27
COMMD3-214ENST00000496071 CNIH2Q6PI25 160 aa13.34□□□□□ -0.27
COMMD3-214ENST00000496071 TCTEX1D1Q8N7M0 179 aa13.34□□□□□ -0.27
COMMD3-214ENST00000496071 NUDCD2Q8WVJ2 157 aa13.34□□□□□ -0.27
COMMD3-214ENST00000496071 SLC25A38Q96DW6 304 aa13.34□□□□□ -0.27
COMMD3-214ENST00000496071 ADTRPQ96IZ2 230 aa13.34□□□□□ -0.27
COMMD3-214ENST00000496071 P2RX4Q99571 388 aa13.34□□□□□ -0.27
COMMD3-214ENST00000496071 MCRIP2Q9BUT9 160 aaKnown RBP13.34□□□□□ -0.27
COMMD3-214ENST00000496071 TRAV18A0A075B6X5 111 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 TRIM64CA6NLI5 447 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 G3V318 75 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 CCL24O00175 119 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 SLC22A5O76082 557 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 IGLV1-40P01703 118 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 IGKV1-16P04430 117 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 FOXB2Q5VYV0 432 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 ZNF562Q6V9R5 426 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 LCNL1Q6ZST4 164 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 MINDY2Q8NBR6 621 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 ANXA10Q9UJ72 324 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 OR2W1Q9Y3N9 320 aa13.33□□□□□ -0.28
COMMD3-214ENST00000496071 FCN1O00602 326 aa13.32□□□□□ -0.28
COMMD3-214ENST00000496071 SSX5O60225 188 aa13.32□□□□□ -0.28
COMMD3-214ENST00000496071 RPS19P39019 145 aaKnown RBP13.32□□□□□ -0.28
COMMD3-214ENST00000496071 LUMP51884 338 aaPredicted RBP13.32□□□□□ -0.28
COMMD3-214ENST00000496071 RTL8BQ17RB0 113 aa13.32□□□□□ -0.28
COMMD3-214ENST00000496071 MYOZ3Q8TDC0 251 aa13.32□□□□□ -0.28
COMMD3-214ENST00000496071 C4orf3Q8WVX3 66 aa13.32□□□□□ -0.28
COMMD3-214ENST00000496071 UBE2E2Q96LR5 201 aa13.32□□□□□ -0.28
COMMD3-214ENST00000496071 NUBP2Q9Y5Y2 271 aa13.32□□□□□ -0.28
COMMD3-214ENST00000496071 NOTCH3Q9UM47 2321 aa13.31□□□□□ -0.28
COMMD3-214ENST00000496071 HLA-DQB1P01920 261 aa13.31□□□□□ -0.28
COMMD3-214ENST00000496071 AKIRIN2Q53H80 203 aa13.31□□□□□ -0.28
COMMD3-214ENST00000496071 TMEM177Q53S58 311 aa13.31□□□□□ -0.28
COMMD3-214ENST00000496071 ZNF645Q8N7E2 425 aa13.31□□□□□ -0.28
COMMD3-214ENST00000496071 BVESQ8NE79 360 aa13.31□□□□□ -0.28
COMMD3-214ENST00000496071 ABHD5Q8WTS1 349 aa13.31□□□□□ -0.28
COMMD3-214ENST00000496071 S100A16Q96FQ6 103 aaKnown RBP13.31□□□□□ -0.28
COMMD3-214ENST00000496071 RAX2Q96IS3 184 aa13.31□□□□□ -0.28
COMMD3-214ENST00000496071 CLCC1Q96S66 551 aa13.31□□□□□ -0.28
COMMD3-214ENST00000496071 A0A1W2PN81 502 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 SLC25A17O43808 307 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 CA2P00918 260 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 NFYAP23511 347 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-214ENST00000496071 DUTP33316 252 aaKnown RBP13.3□□□□□ -0.28
COMMD3-214ENST00000496071 CHRNA7P36544 502 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 TGFBR1P36897 503 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 RAB9AP51151 201 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 LSM3P62310 102 aaKnown RBP13.3□□□□□ -0.28
COMMD3-214ENST00000496071 NDPQ00604 133 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 ECSCRQ19T08 205 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 C19orf54Q5BKX5 351 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 PYHIN1Q6K0P9 492 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 PPP1R27Q86WC6 154 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 ZNF491Q8N8L2 437 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 BEST4Q8NFU0 473 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 DPF1Q92782 380 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 C5orf30Q96GV9 206 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 HARBI1Q96MB7 349 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 KLK15Q9H2R5 256 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 AUNIPQ9H7T9 357 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 FOXA2Q9Y261 457 aaPredicted RBP13.3□□□□□ -0.28
COMMD3-214ENST00000496071 VSIG4Q9Y279 399 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 FBXO7Q9Y3I1 522 aa13.3□□□□□ -0.28
COMMD3-214ENST00000496071 SHOXO15266 292 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 XRCC3O43542 346 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 IGLV2-23P01705 113 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 PRB2P02812 416 aaPredicted RBP13.29□□□□□ -0.28
COMMD3-214ENST00000496071 EGR2P11161 476 aaPredicted RBP13.29□□□□□ -0.28
COMMD3-214ENST00000496071 CD40LGP29965 261 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 CBX5P45973 191 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 ARPC4P59998 168 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 UBE2NLQ5JXB2 153 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 UNQ5815/PRO19632Q6UWF5 114 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 HOGA1Q86XE5 327 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 OR5M8Q8NGP6 311 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 DDB2Q92466 427 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 KCTD12Q96CX2 325 aaKnown RBP13.29□□□□□ -0.28
COMMD3-214ENST00000496071 DUX3Q96PT4 197 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 FUNDC2Q9BWH2 189 aa13.29□□□□□ -0.28
COMMD3-214ENST00000496071 ZMAT5Q9UDW3 170 aaKnown RBP13.29□□□□□ -0.28
COMMD3-214ENST00000496071 J3QRK9 145 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms