RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.6□□□□□ -1.51
VPS52-221ENST00000495755 TXNL4BQ9NX01 149 aaKnown RBP5.6□□□□□ -1.51
VPS52-221ENST00000495755 METTL1Q9UBP6 276 aaKnown RBP5.6□□□□□ -1.51
VPS52-221ENST00000495755 ZNF230Q9UIE0 474 aaPredicted RBP5.6□□□□□ -1.51
VPS52-221ENST00000495755 FOXA2Q9Y261 457 aaPredicted RBP5.6□□□□□ -1.51
VPS52-221ENST00000495755 HUWE1Q7Z6Z7 4374 aaKnown RBP5.59□□□□□ -1.51
VPS52-221ENST00000495755 A0A075B6Q4 140 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 IGKV1D-8A0A087WSZ0 117 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 A0A1W2PN81 502 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 NOTOA8MTQ0 251 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 SEC14L6B5MCN3 397 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 BET1O15155 118 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 RAMP3O60896 148 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 CA2P00918 260 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 IGLV2-23P01705 113 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 CRYGBP07316 175 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 OR8U8P0C7N1 319 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 OR8U9P0C7N5 309 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 PSMB9P28065 219 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 CHRNA7P36544 502 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 LGALS7P47929 136 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 RPS16P62249 146 aaKnown RBP5.59□□□□□ -1.51
VPS52-221ENST00000495755 SSBP2P81877 361 aaPredicted RBP5.59□□□□□ -1.51
VPS52-221ENST00000495755 TMEM267Q0VDI3 215 aaPredicted RBP5.59□□□□□ -1.51
VPS52-221ENST00000495755 ARL6IP1Q15041 203 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 PLGLAQ15195 96 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 ECSCRQ19T08 205 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 CDNFQ49AH0 187 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 C9orf66Q5T8R8 295 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 ZNF773Q6PK81 442 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 TPRA1Q86W33 373 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 PPP1R27Q86WC6 154 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 MAFIPQ8WZ33 124 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 FLYWCH2Q96CP2 140 aaKnown RBP5.59□□□□□ -1.51
VPS52-221ENST00000495755 OR5B12Q96R08 314 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 CLCC1Q96S66 551 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 B9D2Q9BPU9 175 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 ATG5Q9H1Y0 275 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 Q9H521 79 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 TPSG1Q9NRR2 321 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 SLC35D1Q9NTN3 355 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 SDHAF2Q9NX18 166 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 ELF5Q9UKW6 265 aaPredicted RBP5.59□□□□□ -1.51
VPS52-221ENST00000495755 STUB1Q9UNE7 303 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 A3GALT2U3KPV4 340 aa5.59□□□□□ -1.51
VPS52-221ENST00000495755 SMIM30A4D0T7 59 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 ARPC1BO15143 372 aaKnown RBP5.58□□□□□ -1.52
VPS52-221ENST00000495755 SLC25A17O43808 307 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 APOA2P02652 100 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 DTYMKP23919 212 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 TALDO1P37837 337 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 TAGLNQ01995 201 aaKnown RBP5.58□□□□□ -1.52
VPS52-221ENST00000495755 ZNF616Q08AN1 781 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 PJVKQ0ZLH3 352 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 ARFRP1Q13795 201 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 FXYD3Q14802 87 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 MRGPRG-AS1Q2M3A8 158 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 ZNF260Q3ZCT1 412 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 TMEM177Q53S58 311 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 ACTBL2Q562R1 376 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 HACD4Q5VWC8 232 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 PYHIN1Q6K0P9 492 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 UNQ5815/PRO19632Q6UWF5 114 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 H1FOOQ8IZA3 346 aaPredicted RBP5.58□□□□□ -1.52
VPS52-221ENST00000495755 LFNGQ8NES3 379 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 CASTOR1Q8WTX7 329 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 DDB2Q92466 427 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 DCUN1D4Q92564 292 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 ARPC1AQ92747 370 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 DLX4Q92988 240 aaPredicted RBP5.58□□□□□ -1.52
VPS52-221ENST00000495755 RHOVQ96L33 236 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 FAM103A1Q9BTL3 118 aaKnown RBP5.58□□□□□ -1.52
VPS52-221ENST00000495755 CENPOQ9BU64 300 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 ALX4Q9H161 411 aaPredicted RBP5.58□□□□□ -1.52
VPS52-221ENST00000495755 OR2D2Q9H210 308 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 OR51E2Q9H255 320 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 SSR3Q9UNL2 185 aa5.58□□□□□ -1.52
VPS52-221ENST00000495755 LSM4Q9Y4Z0 139 aaKnown RBP5.58□□□□□ -1.52
VPS52-221ENST00000495755 SRRM4A7MD48 611 aaKnown RBP5.57□□□□□ -1.52
VPS52-221ENST00000495755 LINC01619G3V211 115 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 OVOL1O14753 267 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 SSX5O60225 188 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 BRI3O95415 125 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 HLA-DQB1P01920 261 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 LGALS1P09382 135 aaKnown RBP5.57□□□□□ -1.52
VPS52-221ENST00000495755 CTXN2P0C2S0 81 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 CLEC2LP0C7M8 214 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 RRASP10301 218 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 DUTP33316 252 aaKnown RBP5.57□□□□□ -1.52
VPS52-221ENST00000495755 SDC2P34741 201 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 ECI1P42126 302 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 INSL3P51460 131 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 DCTN2Q13561 401 aaKnown RBP5.57□□□□□ -1.52
VPS52-221ENST00000495755 VAX1Q5SQQ9 334 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 C11orf87Q6NUJ2 197 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 SFXN4Q6P4A7 337 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 BVESQ8NE79 360 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 ABHD5Q8WTS1 349 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 ADTRPQ96IZ2 230 aa5.57□□□□□ -1.52
VPS52-221ENST00000495755 MS4A10Q96PG2 267 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms