RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 CENPVL3A0A0U1RRI6 287 aa12.72□□□□□ -0.37
PHF1-211ENST00000495509 ODF3BA8MYP8 253 aa12.72□□□□□ -0.37
PHF1-211ENST00000495509 IFNA2P01563 188 aa12.72□□□□□ -0.37
PHF1-211ENST00000495509 PAX6P26367 422 aa12.72□□□□□ -0.37
PHF1-211ENST00000495509 MSMO1Q15800 293 aa12.72□□□□□ -0.37
PHF1-211ENST00000495509 OR2B11Q5JQS5 317 aa12.72□□□□□ -0.37
PHF1-211ENST00000495509 ZNF833PQ6ZTB9 187 aa12.72□□□□□ -0.37
PHF1-211ENST00000495509 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.72□□□□□ -0.37
PHF1-211ENST00000495509 C17orf50Q8WW18 174 aa12.72□□□□□ -0.37
PHF1-211ENST00000495509 S1PR3Q99500 378 aa12.72□□□□□ -0.37
PHF1-211ENST00000495509 KCNIP3Q9Y2W7 256 aa12.72□□□□□ -0.37
PHF1-211ENST00000495509 SNRPGP15A8MWD9 76 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 LY6LH3BQJ8 138 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 CREBL2O60519 120 aaPredicted RBP12.71□□□□□ -0.37
PHF1-211ENST00000495509 DUS4LO95620 317 aaKnown RBP12.71□□□□□ -0.37
PHF1-211ENST00000495509 CT45A6P0DMU7 189 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 CT45A5P0DMU8 189 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 CT45A7P0DMV0 189 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 S100GP29377 79 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 GZMKP49863 264 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 TMEM187Q14656 261 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 C2orf68Q2NKX9 166 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 CYB5R2Q6BCY4 276 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 ZNF383Q8NA42 475 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 OR11H7Q8NGC8 314 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 TCTEX1D2Q8WW35 142 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 GALNT14Q96FL9 552 aa12.71□□□□□ -0.37
PHF1-211ENST00000495509 RAMP3O60896 148 aa12.71□□□□□ -0.38
PHF1-211ENST00000495509 ANXA3P12429 323 aa12.71□□□□□ -0.38
PHF1-211ENST00000495509 UBE2E1P51965 193 aa12.71□□□□□ -0.38
PHF1-211ENST00000495509 ZNF137PP52743 207 aa12.71□□□□□ -0.38
PHF1-211ENST00000495509 ZNF585BQ52M93 769 aa12.71□□□□□ -0.38
PHF1-211ENST00000495509 ZNF66Q6ZN08 573 aa12.71□□□□□ -0.38
PHF1-211ENST00000495509 C12orf45Q8N5I9 185 aaPredicted RBP12.71□□□□□ -0.38
PHF1-211ENST00000495509 MITD1Q8WV92 249 aa12.71□□□□□ -0.38
PHF1-211ENST00000495509 HSD17B10Q99714 261 aaKnown RBP12.71□□□□□ -0.38
PHF1-211ENST00000495509 MRPL20Q9BYC9 149 aaKnown RBP12.71□□□□□ -0.38
PHF1-211ENST00000495509 SMLR1H3BR10 107 aa12.7□□□□□ -0.38
PHF1-211ENST00000495509 SULT1A3P0DMM9 295 aa12.7□□□□□ -0.38
PHF1-211ENST00000495509 SULT1A4P0DMN0 295 aa12.7□□□□□ -0.38
PHF1-211ENST00000495509 GATA3P23771 443 aa12.7□□□□□ -0.38
PHF1-211ENST00000495509 IFITM2Q01629 132 aa12.7□□□□□ -0.38
PHF1-211ENST00000495509 KCTD9Q7L273 389 aa12.7□□□□□ -0.38
PHF1-211ENST00000495509 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
PHF1-211ENST00000495509 LHFPL5Q8TAF8 219 aa12.7□□□□□ -0.38
PHF1-211ENST00000495509 TMEM222Q9H0R3 208 aa12.7□□□□□ -0.38
PHF1-211ENST00000495509 HILPDAQ9Y5L2 63 aa12.7□□□□□ -0.38
PHF1-211ENST00000495509 H0Y980 276 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 ATP6V1G1O75348 118 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 IGHV4-38-2P0DP08 117 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 HTR1DP28221 377 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 DYNAPQ8N1N2 210 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 DDB2Q92466 427 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 AJUBAQ96IF1 538 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 DPM3Q9P2X0 92 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 SONP18583 2426 aaKnown RBP12.69□□□□□ -0.38
PHF1-211ENST00000495509 TRAV40A0A0B4J280 105 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 CXCL3P19876 107 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 IL3RAP26951 378 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 KLF17Q5JT82 389 aaPredicted RBP12.69□□□□□ -0.38
PHF1-211ENST00000495509 RUSC1-AS1Q66K80 236 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 LIAT1Q6ZQX7 453 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 TGIF2LXQ8IUE1 241 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 SPAG16Q8N0X2 631 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 PHB2Q99623 299 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 NABP2Q9BQ15 211 aa12.69□□□□□ -0.38
PHF1-211ENST00000495509 AMMECR1Q9Y4X0 333 aaPredicted RBP12.69□□□□□ -0.38
PHF1-211ENST00000495509 RNF212BA8MTL3 300 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 FCGR3BO75015 233 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 ADAP1O75689 374 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 IGKV1-39P01597 117 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 IGKV1D-39P04432 117 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 UCP1P25874 307 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 SAA4P35542 130 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 LPAR6P43657 344 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 ZNF816Q0VGE8 651 aaPredicted RBP12.68□□□□□ -0.38
PHF1-211ENST00000495509 CATR1Q13166 79 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 TPTE2P1Q5T6R2 138 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 BRD3OSQ6XYD6 125 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 RPEQ96AT9 228 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 HYLS1Q96M11 299 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 LIN7CQ9NUP9 197 aaKnown RBP12.68□□□□□ -0.38
PHF1-211ENST00000495509 BOLA1Q9Y3E2 137 aa12.68□□□□□ -0.38
PHF1-211ENST00000495509 SOX21Q9Y651 276 aaPredicted RBP12.68□□□□□ -0.38
PHF1-211ENST00000495509 ZFHX3Q15911 3703 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 IGHV3-72A0A0B4J1Y9 119 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 IGHV1-69DA0A0B4J2H0 117 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 DBX1A6NMT0 343 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 LEUTXA8MZ59 168 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 NPFFO15130 113 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 SIX6O95475 246 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 CDS2O95674 445 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 IGHV1-69P01742 117 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 GAPDHP04406 335 aaKnown RBP12.67□□□□□ -0.38
PHF1-211ENST00000495509 SERPINE2P07093 398 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 THBS3P49746 956 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 LGALS4P56470 323 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 SSX2Q16385 188 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 C11orf88Q6PI97 169 aa12.67□□□□□ -0.38
PHF1-211ENST00000495509 LYZL2Q7Z4W2 148 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms