RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 FFAR4Q5NUL3 377 aa12.46□□□□□ -0.41
UBXN11-215ENST00000494942 ACP7Q6ZNF0 438 aa12.46□□□□□ -0.41
UBXN11-215ENST00000494942 Q6ZT83 130 aa12.46□□□□□ -0.41
UBXN11-215ENST00000494942 TGIF2LYQ8IUE0 185 aa12.46□□□□□ -0.41
UBXN11-215ENST00000494942 C11orf53Q8IXP5 236 aa12.46□□□□□ -0.41
UBXN11-215ENST00000494942 LOXL4Q96JB6 756 aa12.46□□□□□ -0.41
UBXN11-215ENST00000494942 LURAP1Q96LR2 239 aa12.46□□□□□ -0.41
UBXN11-215ENST00000494942 HSD17B10Q99714 261 aaKnown RBP12.46□□□□□ -0.41
UBXN11-215ENST00000494942 SSX3Q99909 188 aa12.46□□□□□ -0.41
UBXN11-215ENST00000494942 SLC25A22Q9H936 323 aa12.46□□□□□ -0.41
UBXN11-215ENST00000494942 CHD3Q12873 2000 aaKnown RBP12.46□□□□□ -0.42
UBXN11-215ENST00000494942 C17orf112F2Z3M2 114 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 IFNL4K9M1U5 179 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 MLNRO43193 412 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 ZG16O60844 167 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 LY86O95711 162 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 PFN1P07737 140 aaKnown RBP12.45□□□□□ -0.42
UBXN11-215ENST00000494942 HIST1H1BP16401 226 aaKnown RBP12.45□□□□□ -0.42
UBXN11-215ENST00000494942 BRWD1-AS2P59051 145 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 GNB2P62879 340 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 GFI1BQ5VTD9 330 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 FAM214BQ7L5A3 538 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 ZNF383Q8NA42 475 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 COQ2Q96H96 371 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 OR5B12Q96R08 314 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 NPCDR1Q9BY65 106 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 DMXL1Q9Y485 3027 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 MED13Q9UHV7 2174 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 EP300Q09472 2414 aaPredicted RBP12.45□□□□□ -0.42
UBXN11-215ENST00000494942 WNT9BO14905 357 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 RPL23P62829 140 aaKnown RBP12.45□□□□□ -0.42
UBXN11-215ENST00000494942 C16orf82Q7Z2V1 217 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 MRGPRDQ8TDS7 321 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 RPUSD4Q96CM3 377 aaKnown RBP12.45□□□□□ -0.42
UBXN11-215ENST00000494942 CLCF1Q9UBD9 225 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 WASF3Q9UPY6 502 aa12.45□□□□□ -0.42
UBXN11-215ENST00000494942 ZFHX2Q9C0A1 2572 aaPredicted RBP12.44□□□□□ -0.42
UBXN11-215ENST00000494942 HOXC12P31275 282 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 C4orf17Q53FE4 359 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 TRAT1Q6PIZ9 186 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 ZNF826PQ6ZT77 177 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 ANAPC16Q96DE5 110 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 PARLQ9H300 379 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 GFOD1Q9NXC2 390 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 H7BYZ3 331 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 RBMXL2O75526 392 aaKnown RBP12.44□□□□□ -0.42
UBXN11-215ENST00000494942 IGKV3-15P01624 115 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 FABP4P15090 132 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 MDKP21741 143 aaPredicted RBP12.44□□□□□ -0.42
UBXN11-215ENST00000494942 SMIM21Q3B7S5 101 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 PDZD11Q5EBL8 140 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 KIAA2026Q5HYC2 2103 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 CXorf67Q86X51 503 aaPredicted RBP12.44□□□□□ -0.42
UBXN11-215ENST00000494942 OR51G1Q8NGK1 321 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 OR4F5Q8NH21 305 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 RAB24Q969Q5 203 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 OR4F4Q96R69 305 aa12.44□□□□□ -0.42
UBXN11-215ENST00000494942 TRBV23-1A0A0A0MS06 115 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 SMCO3A2RU48 225 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 HMGB3O15347 200 aaKnown RBP12.43□□□□□ -0.42
UBXN11-215ENST00000494942 SOX15O60248 233 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 VENTXO95231 258 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 HNF4GQ14541 408 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 PLA2G2CQ5R387 149 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 BTNL3Q6UXE8 466 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 WDR82Q6UXN9 313 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 OR4X1Q8NH49 305 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 ZDHHC16Q969W1 377 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 SPINT2O43291 252 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 ADH4P08319 380 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 KITLGP21583 273 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 GALR1P47211 349 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 SOX8P57073 446 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 HTD2P86397 168 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 PAX5Q02548 391 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 TFF3Q07654 80 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 ACOT6Q3I5F7 207 aaPredicted RBP12.43□□□□□ -0.42
UBXN11-215ENST00000494942 GCNT2Q8N0V5 402 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 C1orf162Q8NEQ5 155 aaPredicted RBP12.43□□□□□ -0.42
UBXN11-215ENST00000494942 NEIL1Q96FI4 390 aaPredicted RBP12.43□□□□□ -0.42
UBXN11-215ENST00000494942 SNX22Q96L94 193 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 DIRC2Q96SL1 478 aa12.43□□□□□ -0.42
UBXN11-215ENST00000494942 RIF1Q5UIP0 2472 aaKnown RBP12.42□□□□□ -0.42
UBXN11-215ENST00000494942 MARCH11A6NNE9 402 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 PPP5D1E7EU14 171 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 TIMM8AO60220 97 aaPredicted RBP12.42□□□□□ -0.42
UBXN11-215ENST00000494942 TNFSF10P50591 281 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 COL10A1Q03692 680 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 FAM53AQ6NSI3 398 aaPredicted RBP12.42□□□□□ -0.42
UBXN11-215ENST00000494942 Q6ZR03 302 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 TMEM183AQ8IXX5 376 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 FAM216AQ8WUB2 273 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 PACRGQ96M98 296 aaPredicted RBP12.42□□□□□ -0.42
UBXN11-215ENST00000494942 PRDM13Q9H4Q3 707 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 ZNF292O60281 2723 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 FAM90A9PA6NNJ1 464 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 LINC00473A8K010 186 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 CDX4O14627 284 aaPredicted RBP12.42□□□□□ -0.42
UBXN11-215ENST00000494942 IGHG3P01860 377 aa12.42□□□□□ -0.42
UBXN11-215ENST00000494942 NHLH1Q02575 133 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms