RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ZNF221Q9UK13 617 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 ALMS1Q8TCU4 4167 aa9.67□□□□□ -0.86
SKA1-205ENST00000494518 IGKV1-6A0A0C4DH72 117 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 BPNT1O95861 308 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 TRBV12-3P01733 135 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 APOA2P02652 100 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 CD3GP09693 182 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 SRMP19623 302 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 ZBTB25P24278 435 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 VEGFCP49767 419 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 CLDN12P56749 244 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 SYNJ2BPP57105 145 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 SSBP2P81877 361 aaPredicted RBP9.66□□□□□ -0.86
SKA1-205ENST00000494518 RCN1Q15293 331 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 PACRGLQ8N7B6 248 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 PHYHIPQ92561 330 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 TMEM203Q969S6 136 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 ISOC1Q96CN7 298 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 ARHGAP5-AS1Q96IT6 56 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 GFI1Q99684 422 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 MND1Q9BWT6 205 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 EDA2RQ9HAV5 297 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 PLGRKTQ9HBL7 147 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 RANGRFQ9HD47 186 aaPredicted RBP9.66□□□□□ -0.86
SKA1-205ENST00000494518 Q9N2K0 584 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 SLC35D1Q9NTN3 355 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 PLCXD1Q9NUJ7 323 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 C19orf73Q9NVV2 129 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 FKBP14Q9NWM8 211 aa9.66□□□□□ -0.86
SKA1-205ENST00000494518 AK6Q9Y3D8 172 aaKnown RBP9.66□□□□□ -0.86
SKA1-205ENST00000494518 TRBV6-6A0A0A6YYG2 114 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 PTGES3LE9PB15 166 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 ITGB1BP1O14713 200 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 SPDEFO95238 335 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 MED22Q15528 200 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 PDPNQ86YL7 162 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 MS4A15Q8N5U1 240 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 OR6M1Q8NGM8 313 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 RNF5Q99942 180 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 CMSS1Q9BQ75 279 aaKnown RBP9.65□□□□□ -0.86
SKA1-205ENST00000494518 URM1Q9BTM9 101 aaKnown RBP9.65□□□□□ -0.86
SKA1-205ENST00000494518 PECRQ9BY49 303 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 RIMS4Q9H426 269 aaPredicted RBP9.65□□□□□ -0.86
SKA1-205ENST00000494518 RETNQ9HD89 108 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 C12orf4Q9NQ89 552 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 RDH8Q9NYR8 311 aa9.65□□□□□ -0.86
SKA1-205ENST00000494518 IZUMO1RA6ND01 250 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 FOXI3A8MTJ6 420 aaPredicted RBP9.64□□□□□ -0.87
SKA1-205ENST00000494518 IGLV2-23P01705 113 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 CDK1P06493 297 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 UCHL1P09936 223 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 ZP3P21754 424 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 TMEM50BP56557 158 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 PLA2G7Q13093 441 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 HAGHQ16775 308 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 LIPKQ5VXJ0 399 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 OR9G4Q8NGQ1 327 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 FBLIM1Q8WUP2 373 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 PTX4Q96A99 478 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 C5orf30Q96GV9 206 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 OR2D2Q9H210 308 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 COA4Q9NYJ1 87 aa9.64□□□□□ -0.87
SKA1-205ENST00000494518 LSM2Q9Y333 95 aaKnown RBP9.64□□□□□ -0.87
SKA1-205ENST00000494518 EBAG9O00559 213 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 BET1O15155 118 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 RBMXL2O75526 392 aaKnown RBP9.63□□□□□ -0.87
SKA1-205ENST00000494518 RPS25P62851 125 aaKnown RBP9.63□□□□□ -0.87
SKA1-205ENST00000494518 KLF5Q13887 457 aaPredicted RBP9.63□□□□□ -0.87
SKA1-205ENST00000494518 SPHARQ15513 63 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 RAB11BQ15907 218 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 PLAC9Q5JTB6 97 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 IL34Q6ZMJ4 242 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 MAFIPQ8WZ33 124 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 HARBI1Q96MB7 349 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 PHB2Q99623 299 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 FAM110AQ9BQ89 295 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 SPATA25Q9BR10 227 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 TUBA4BQ9H853 241 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 C8orf4Q9NR00 106 aa9.63□□□□□ -0.87
SKA1-205ENST00000494518 A0A0G2JLM5 398 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 TRDCB7Z8K6 153 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 H3BUA1 57 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 SLC17A2O00624 439 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 SHOXO15266 292 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 CRYGBP07316 175 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 CSN3P07498 182 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 HSMCR30P0CW71 290 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 DYRK1AQ13627 763 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 IGSF11Q5DX21 431 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 TMEM91Q6ZNR0 172 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 IDO2Q6ZQW0 420 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 FAM89BQ8N5H3 189 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 BVESQ8NE79 360 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 UFD1Q92890 307 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 TINAGL1Q9GZM7 467 aaPredicted RBP9.62□□□□□ -0.87
SKA1-205ENST00000494518 PLEKHA3Q9HB20 300 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 SDHAF2Q9NX18 166 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 PEF1Q9UBV8 284 aaKnown RBP9.62□□□□□ -0.87
SKA1-205ENST00000494518 HSF4Q9ULV5 492 aa9.62□□□□□ -0.87
SKA1-205ENST00000494518 MGAT4AQ9UM21 535 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms