RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 LINC00473A8K010 186 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 NBR2O15453 112 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 RBBP9O75884 186 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 IGKV1-16P04430 117 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 VSIG10L2P0DP72 767 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 HRH1P35367 487 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 THBS3P49746 956 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 IL18Q14116 193 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 FOXB2Q5VYV0 432 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 ZNF660Q6AZW8 331 aaPredicted RBP10.73□□□□□ -0.69
COL1A1-208ENST00000494334 PYHIN1Q6K0P9 492 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 PDPNQ86YL7 162 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 NPBQ8NG41 125 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 RNF5Q99942 180 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 RASL11BQ9BPW5 248 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 MMP27Q9H306 513 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 CCL28Q9NRJ3 127 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 SLC35D1Q9NTN3 355 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 MTFP1Q9UDX5 166 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 RBMX2Q9Y388 322 aaKnown RBP10.73□□□□□ -0.69
COL1A1-208ENST00000494334 A3GALT2U3KPV4 340 aa10.73□□□□□ -0.69
COL1A1-208ENST00000494334 LINC01548A6NM66 108 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 GABARAPH6UMI1 98 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 CTDSPLO15194 276 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 PEX14O75381 377 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 NDUFA3O95167 84 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 IGHG2P01859 326 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 APOA2P02652 100 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 FXYD4P59646 89 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 RPS16P62249 146 aaKnown RBP10.72□□□□□ -0.69
COL1A1-208ENST00000494334 DGCR2P98153 550 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 TAGLNQ01995 201 aaKnown RBP10.72□□□□□ -0.69
COL1A1-208ENST00000494334 EIF4EBP1Q13541 118 aaPredicted RBP10.72□□□□□ -0.69
COL1A1-208ENST00000494334 BVESQ8NE79 360 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 WIPF2Q8TF74 440 aaPredicted RBP10.72□□□□□ -0.69
COL1A1-208ENST00000494334 SECTM1Q8WVN6 248 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 FCAMRQ8WWV6 532 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 DDB2Q92466 427 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 FLYWCH2Q96CP2 140 aaKnown RBP10.72□□□□□ -0.69
COL1A1-208ENST00000494334 ADTRPQ96IZ2 230 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 ZNF2Q9BSG1 426 aaPredicted RBP10.72□□□□□ -0.69
COL1A1-208ENST00000494334 RABL2AQ9UBK7 228 aaPredicted RBP10.72□□□□□ -0.69
COL1A1-208ENST00000494334 RABL2BQ9UNT1 228 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 ANK2Q01484 3957 aa10.72□□□□□ -0.69
COL1A1-208ENST00000494334 FABP12A6NFH5 140 aa10.71□□□□□ -0.69
COL1A1-208ENST00000494334 RPL30P62888 115 aaKnown RBP10.71□□□□□ -0.69
COL1A1-208ENST00000494334 MRPS10P82664 201 aaKnown RBP10.71□□□□□ -0.69
COL1A1-208ENST00000494334 MSMO1Q15800 293 aa10.71□□□□□ -0.69
COL1A1-208ENST00000494334 C5orf64Q2M2E5 130 aa10.71□□□□□ -0.69
COL1A1-208ENST00000494334 SLC35E3Q7Z769 313 aa10.71□□□□□ -0.69
COL1A1-208ENST00000494334 TMEM17Q86X19 198 aa10.71□□□□□ -0.69
COL1A1-208ENST00000494334 OR6F1Q8NGZ6 308 aa10.71□□□□□ -0.69
COL1A1-208ENST00000494334 HSPB9Q9BQS6 159 aa10.71□□□□□ -0.69
COL1A1-208ENST00000494334 SLC5A7Q9GZV3 580 aa10.71□□□□□ -0.69
COL1A1-208ENST00000494334 KIAA1456Q9P272 454 aa10.71□□□□□ -0.69
COL1A1-208ENST00000494334 M0QYG6 137 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 RRHO14718 337 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 CD3DP04234 171 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 RRASP10301 218 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 HERV-K104P61576 105 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 TSPAN5P62079 268 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 PSG5Q15238 335 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 TMEM177Q53S58 311 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 ACTBL2Q562R1 376 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 VAX1Q5SQQ9 334 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 HIST2H2BDQ6DRA6 164 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 LIN54Q6MZP7 749 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 ZNF818PQ6ZRF7 136 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 CENPVQ7Z7K6 275 aaPredicted RBP10.7□□□□□ -0.7
COL1A1-208ENST00000494334 MFSD4AQ8N468 514 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 C11orf44Q8N8P7 122 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 ZBTB34Q8NCN2 500 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 SMIM4Q8WVI0 70 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 MOB3AQ96BX8 217 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 NOL4LQ96MY1 436 aaPredicted RBP10.7□□□□□ -0.7
COL1A1-208ENST00000494334 GPHA2Q96T91 129 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 HSD17B10Q99714 261 aaKnown RBP10.7□□□□□ -0.7
COL1A1-208ENST00000494334 FBXL15Q9H469 300 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 TAS2R8Q9NYW2 309 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 LINC00527Q9UJ94 153 aa10.7□□□□□ -0.7
COL1A1-208ENST00000494334 SRRM4A7MD48 611 aaKnown RBP10.69□□□□□ -0.7
COL1A1-208ENST00000494334 TNFSF12O43508 249 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 FCGR3BO75015 233 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 IGLV2-23P01705 113 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 HLA-DRB1P01911 266 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 GNRHRP30968 328 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 S100A5P33763 92 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 LGALS7P47929 136 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 SSBP1Q04837 148 aaKnown RBP10.69□□□□□ -0.7
COL1A1-208ENST00000494334 RTL8BQ17RB0 113 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 C10orf99Q6UWK7 81 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 ZNF66Q6ZN08 573 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 KCTD9Q7L273 389 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 TMEM229BQ8NBD8 167 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 OR5AU1Q8NGC0 362 aa10.69□□□□□ -0.7
COL1A1-208ENST00000494334 TSNAXQ99598 290 aaKnown RBP10.69□□□□□ -0.7
COL1A1-208ENST00000494334 TINAGL1Q9GZM7 467 aaPredicted RBP10.69□□□□□ -0.7
COL1A1-208ENST00000494334 ZNF107Q9UII5 783 aaPredicted RBP10.69□□□□□ -0.7
COL1A1-208ENST00000494334 TENM1Q9UKZ4 2725 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms