RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 TAAR8Q969N4 342 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 RARRES2Q99969 163 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 SUCNR1Q9BXA5 334 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 TMEM222Q9H0R3 208 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 ATG5Q9H1Y0 275 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 PROK2Q9HC23 129 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 NIT2Q9NQR4 276 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 PSG11Q9UQ72 335 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 TRBV9A0A0B4J1U6 114 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 KANTRA0A1W2PQU2 76 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 CASTOR2A6NHX0 329 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 CPSF4LA6NMK7 179 aaKnown RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 C17orf98A8MV24 154 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 DISC1C4P0D8 188 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 E5RGE8 158 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 C15orf65H3BRN8 121 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 HSPB6O14558 160 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 STK17BO94768 372 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 TOXO94900 526 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 TNFP01375 233 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 IFNA21P01568 189 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 SLC35G6P0C7Q6 338 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 FGF7P21781 194 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 GNLYP22749 145 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 CNN1P51911 297 aaKnown RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 FOXA3P55318 350 aaPredicted RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 MAZP56270 477 aaKnown RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 ERVK11-1P61568 191 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 RPL23P62829 140 aaKnown RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 SKP1P63208 163 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 EWSR1Q01844 656 aaKnown RBP eCLIP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 TGM3Q08188 693 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 TWF1Q12792 350 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 ZNF672Q499Z4 452 aaPredicted RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 ZNF57Q68EA5 555 aaPredicted RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 LINC00596Q86U02 117 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 YRDCQ86U90 279 aaKnown RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 FAM58AQ8N1B3 248 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR10H4Q8NGA5 316 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 RAB8BQ92930 207 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 ST6GALNAC6Q969X2 333 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 SMIM12Q96EX1 92 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 CSTL1Q9H114 145 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 RIMS4Q9H426 269 aaPredicted RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 HIF1ANQ9NWT6 349 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 SIGLEC8Q9NYZ4 499 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 MLXQ9UH92 298 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 NSG2Q9Y328 171 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 TRAV27A0A087WT01 109 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 FAM90A26D6RGX4 464 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 K7EN84 100 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 SOX15O60248 233 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 TNFSF15O95150 251 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 IGLC2P0DOY2 106 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 IGLC3P0DOY3 106 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 GLRA1P23415 457 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 HRH1P35367 487 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 ASCL1P50553 236 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 RAB9AP51151 201 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 BIDP55957 195 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 RPL18Q07020 188 aaKnown RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 ENDOGQ14249 297 aaKnown RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 GUSBP1Q15486 140 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 PRAMEF5Q5TYX0 476 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 PRAMEF6Q5VXH4 476 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 RAET1LQ5VY80 246 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 PLCXD3Q63HM9 321 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 FAM231DQ6ZW35 169 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 BOD1L2Q8IYS8 172 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 GCNT2Q8N0V5 402 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 LYG1Q8N1E2 194 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 CD177Q8N6Q3 437 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 SPATA3Q8NHX4 192 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 NICN1Q9BSH3 213 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 MTIF3Q9H2K0 278 aaKnown RBP2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 ZNF665Q9H7R5 613 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 NAA60Q9H7X0 242 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 SCRT2Q9NQ03 307 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 ASF1BQ9NVP2 202 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 PLEK2Q9NYT0 353 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 TAS2R4Q9NYW5 299 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 KCNIP3Q9Y2W7 256 aa2.06□□□□□ -2.08
CDC42EP3-205ENST00000494083 A0A1B0GW55 424 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 GAGE12JA6NER3 117 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 A6NIN4 97 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR2AG2A6NM03 316 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 ZNF587BE7ETH6 402 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 H0Y980 276 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 H0YIG0 161 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 TAX1BP3O14907 124 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 FGF17O60258 216 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 CPSF4O95639 269 aaKnown RBP2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 HLA-AP01891 365 aaKnown RBP2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 CATP04040 527 aaKnown RBP2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 SERPINA7P05543 415 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 DUX4L2P0CJ85 424 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 DUX4L3P0CJ86 424 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 DUX4L4P0CJ87 422 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 DUX4L5P0CJ88 424 aa2.05□□□□□ -2.08
CDC42EP3-205ENST00000494083 DUX4L6P0CJ89 424 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms