RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 ATP6V1G2O95670 118 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 CA2P00918 260 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 HIST1H1DP16402 221 aaKnown RBP7.55□□□□□ -1.2
UFD1-210ENST00000494054 RAB3BP20337 219 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 RAB6AP20340 208 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 MYL9P24844 172 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 ECI1P42126 302 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 SERPINB10P48595 397 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 GABARAPL2P60520 117 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 SSBP2P81877 361 aaPredicted RBP7.55□□□□□ -1.2
UFD1-210ENST00000494054 CD69Q07108 199 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 AKIRIN2Q53H80 203 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 UBE2UQ5VVX9 321 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 UNQ5815/PRO19632Q6UWF5 114 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 ZNF562Q6V9R5 426 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 SPARTQ8N0X7 666 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 LFNGQ8NES3 379 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 DCUN1D4Q92564 292 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 MS4A10Q96PG2 267 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 TSNAXQ99598 290 aaKnown RBP7.55□□□□□ -1.2
UFD1-210ENST00000494054 CABLES2Q9BTV7 478 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 SDHAF2Q9NX18 166 aa7.55□□□□□ -1.2
UFD1-210ENST00000494054 FOXA2Q9Y261 457 aaPredicted RBP7.55□□□□□ -1.2
UFD1-210ENST00000494054 MRPS14O60783 128 aaKnown RBP7.54□□□□□ -1.2
UFD1-210ENST00000494054 IGLV2-23P01705 113 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 IGHV3-11P01762 117 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 APOA2P02652 100 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 CRYGBP07316 175 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 OR8U8P0C7N1 319 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 GALP22466 123 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 GADD45AP24522 165 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 RANBP1P43487 201 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 SLURP1P55000 103 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 MRPS15P82914 257 aaKnown RBP7.54□□□□□ -1.2
UFD1-210ENST00000494054 TMEM267Q0VDI3 215 aaPredicted RBP7.54□□□□□ -1.2
UFD1-210ENST00000494054 PJVKQ0ZLH3 352 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 ACTBL2Q562R1 376 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 PDPNQ86YL7 162 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 TCTEX1D1Q8N7M0 179 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.54□□□□□ -1.2
UFD1-210ENST00000494054 OR10J5Q8NHC4 309 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 DLX4Q92988 240 aaPredicted RBP7.54□□□□□ -1.2
UFD1-210ENST00000494054 FLYWCH2Q96CP2 140 aaKnown RBP7.54□□□□□ -1.2
UFD1-210ENST00000494054 ATG5Q9H1Y0 275 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 OR2D2Q9H210 308 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 SLC35D1Q9NTN3 355 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 TXNL4BQ9NX01 149 aaKnown RBP7.54□□□□□ -1.2
UFD1-210ENST00000494054 ZMAT5Q9UDW3 170 aaKnown RBP7.54□□□□□ -1.2
UFD1-210ENST00000494054 COL7A1Q02388 2944 aa7.54□□□□□ -1.2
UFD1-210ENST00000494054 IGHV4OR15-8A0A075B7B6 117 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 A0A087WW49 117 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 METTL21EPA6NDL7 271 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 SRRM4A7MD48 611 aaKnown RBP7.53□□□□□ -1.2
UFD1-210ENST00000494054 LINC01619G3V211 115 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 OVOL1O14753 267 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 SPDEFO95238 335 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 DIRAS3O95661 229 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 LGALS1P09382 135 aaKnown RBP7.53□□□□□ -1.2
UFD1-210ENST00000494054 PSMB9P28065 219 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 FGF9P31371 208 aaPredicted RBP7.53□□□□□ -1.2
UFD1-210ENST00000494054 ARFRP1Q13795 201 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 FXYD3Q14802 87 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 MRGPRG-AS1Q2M3A8 158 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 CDNFQ49AH0 187 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 Q6ZS49 121 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 BVESQ8NE79 360 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 GRPEL2Q8TAA5 225 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 ARPC1AQ92747 370 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 RHOVQ96L33 236 aa7.53□□□□□ -1.2
UFD1-210ENST00000494054 KMT2CQ8NEZ4 4911 aaKnown RBP7.52□□□□□ -1.21
UFD1-210ENST00000494054 NOTOA8MTQ0 251 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 J3QRK9 145 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 CLEC2LP0C7M8 214 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 DUTP33316 252 aaKnown RBP7.52□□□□□ -1.21
UFD1-210ENST00000494054 TALDO1P37837 337 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 LGALS7P47929 136 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 TPPP2P59282 170 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 SRSF7Q16629 238 aaKnown RBP eCLIP7.52□□□□□ -1.21
UFD1-210ENST00000494054 TMEM177Q53S58 311 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 H1FOOQ8IZA3 346 aaPredicted RBP7.52□□□□□ -1.21
UFD1-210ENST00000494054 OR5T1Q8NG75 326 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 DDB2Q92466 427 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 OR51E2Q9H255 320 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 RNF167Q9H6Y7 350 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.52□□□□□ -1.21
UFD1-210ENST00000494054 STUB1Q9UNE7 303 aa7.52□□□□□ -1.21
UFD1-210ENST00000494054 ZNF256Q9Y2P7 627 aaPredicted RBP7.52□□□□□ -1.21
UFD1-210ENST00000494054 LINC00473A8K010 186 aa7.51□□□□□ -1.21
UFD1-210ENST00000494054 SAP30O75446 220 aa7.51□□□□□ -1.21
UFD1-210ENST00000494054 CNIH1O95406 144 aa7.51□□□□□ -1.21
UFD1-210ENST00000494054 TRGV3P03979 118 aa7.51□□□□□ -1.21
UFD1-210ENST00000494054 HSPB1P04792 205 aaKnown RBP7.51□□□□□ -1.21
UFD1-210ENST00000494054 DTYMKP23919 212 aa7.51□□□□□ -1.21
UFD1-210ENST00000494054 INSL3P51460 131 aa7.51□□□□□ -1.21
UFD1-210ENST00000494054 DCTN2Q13561 401 aaKnown RBP7.51□□□□□ -1.21
UFD1-210ENST00000494054 PYHIN1Q6K0P9 492 aa7.51□□□□□ -1.21
UFD1-210ENST00000494054 POC5Q8NA72 575 aa7.51□□□□□ -1.21
UFD1-210ENST00000494054 LGALS14Q8TCE9 139 aa7.51□□□□□ -1.21
UFD1-210ENST00000494054 NUDCD2Q8WVJ2 157 aa7.51□□□□□ -1.21
UFD1-210ENST00000494054 HARBI1Q96MB7 349 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms