RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 NOTCH1P46531 2555 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 ATP6V0E1O15342 81 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 HPGDSO60760 199 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 TUSC2O75896 110 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 IGLV2-14P01704 120 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 APOA1P02647 267 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 DUTP33316 252 aaKnown RBP12.68□□□□□ -0.38
SATB1-217ENST00000493952 THBS3P49746 956 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 LUMP51884 338 aaPredicted RBP12.68□□□□□ -0.38
SATB1-217ENST00000493952 RPL23AP62750 156 aaKnown RBP12.68□□□□□ -0.38
SATB1-217ENST00000493952 PLGLAQ15195 96 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 PSG5Q15238 335 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 TEX38Q6PEX7 206 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 ZNF645Q8N7E2 425 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 BVESQ8NE79 360 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 DDB2Q92466 427 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 FLYWCH2Q96CP2 140 aaKnown RBP12.68□□□□□ -0.38
SATB1-217ENST00000493952 CMTM3Q96MX0 182 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 PARP11Q9NR21 331 aa12.68□□□□□ -0.38
SATB1-217ENST00000493952 METTL1Q9UBP6 276 aaKnown RBP12.68□□□□□ -0.38
SATB1-217ENST00000493952 LINC00473A8K010 186 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 FCN1O00602 326 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 SPDEFO95238 335 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 PF4V1P10720 104 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 ELK1P19419 428 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 VDAC1P21796 283 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 CBX5P45973 191 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 RPS16P62249 146 aaKnown RBP12.67□□□□□ -0.38
SATB1-217ENST00000493952 NDPQ00604 133 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 LCNL1Q6ZST4 164 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 C18orf65Q6ZTR6 163 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 TSNAXQ99598 290 aaKnown RBP12.67□□□□□ -0.38
SATB1-217ENST00000493952 NECAP2Q9NVZ3 263 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 FBXO7Q9Y3I1 522 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 TNCP24821 2201 aa12.67□□□□□ -0.38
SATB1-217ENST00000493952 G3V318 75 aa12.66□□□□□ -0.38
SATB1-217ENST00000493952 IGLV2-23P01705 113 aa12.66□□□□□ -0.38
SATB1-217ENST00000493952 IGHG4P01861 327 aa12.66□□□□□ -0.38
SATB1-217ENST00000493952 RPLP1P05386 114 aaKnown RBP12.66□□□□□ -0.38
SATB1-217ENST00000493952 ZNF182P17025 639 aaPredicted RBP12.66□□□□□ -0.38
SATB1-217ENST00000493952 TAGLNQ01995 201 aaKnown RBP12.66□□□□□ -0.38
SATB1-217ENST00000493952 TMEM177Q53S58 311 aa12.66□□□□□ -0.38
SATB1-217ENST00000493952 CLVS1Q8IUQ0 354 aaPredicted RBP12.66□□□□□ -0.38
SATB1-217ENST00000493952 ADTRPQ96IZ2 230 aa12.66□□□□□ -0.38
SATB1-217ENST00000493952 IFT46Q9NQC8 304 aa12.66□□□□□ -0.38
SATB1-217ENST00000493952 TPSG1Q9NRR2 321 aa12.66□□□□□ -0.38
SATB1-217ENST00000493952 ANAPC10Q9UM13 185 aa12.66□□□□□ -0.38
SATB1-217ENST00000493952 RBMX2Q9Y388 322 aaKnown RBP12.66□□□□□ -0.38
SATB1-217ENST00000493952 WSB1Q9Y6I7 421 aa12.66□□□□□ -0.38
SATB1-217ENST00000493952 SLC25A17O43808 307 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 OR5H8P0DN80 308 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 AADACP22760 399 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 PPIFP30405 207 aaKnown RBP12.65□□□□□ -0.38
SATB1-217ENST00000493952 FCGR2CP31995 323 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 PRSS3P35030 304 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 CX3CL1P78423 397 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 FOXE3Q13461 319 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 SPCS2Q15005 226 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 RTL8BQ17RB0 113 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 ZNF660Q6AZW8 331 aaPredicted RBP12.65□□□□□ -0.38
SATB1-217ENST00000493952 MZT2AQ6P582 158 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 C1QL4Q86Z23 238 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 RNF152Q8N8N0 203 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 OR5AP2Q8NGF4 316 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 AP3S1Q92572 193 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 HARBI1Q96MB7 349 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 CLCC1Q96S66 551 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 ZFP57Q9NU63 452 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 MRPS7Q9Y2R9 242 aaKnown RBP12.65□□□□□ -0.38
SATB1-217ENST00000493952 MEGF8Q7Z7M0 2845 aa12.65□□□□□ -0.38
SATB1-217ENST00000493952 TRAV41A0A0B4J266 112 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 SLC22A5O76082 557 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 CA2P00918 260 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 PPYP01298 95 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 PF4P02776 101 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 ELANEP08246 267 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 RRASP10301 218 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 PSMB8P28062 276 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 RPL30P62888 115 aaKnown RBP12.64□□□□□ -0.39
SATB1-217ENST00000493952 CBX3Q13185 183 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 CDK10Q15131 360 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 ECSCRQ19T08 205 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 CXorf66Q5JRM2 361 aaPredicted RBP12.64□□□□□ -0.39
SATB1-217ENST00000493952 ETV3LQ6ZN32 361 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 C8orf86Q6ZUL3 223 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 KCTD9Q7L273 389 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 SNX29P2Q8IUI4 249 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 KLHL30-AS1Q8NEE0 82 aa12.64□□□□□ -0.39
SATB1-217ENST00000493952 SMIM31A0A1B0GVY4 71 aa12.63□□□□□ -0.39
SATB1-217ENST00000493952 SRRM4A7MD48 611 aaKnown RBP12.63□□□□□ -0.39
SATB1-217ENST00000493952 NUDT19A8MXV4 375 aa12.63□□□□□ -0.39
SATB1-217ENST00000493952 G3V4G9 280 aa12.63□□□□□ -0.39
SATB1-217ENST00000493952 SHOXO15266 292 aa12.63□□□□□ -0.39
SATB1-217ENST00000493952 CRYZL1O95825 349 aa12.63□□□□□ -0.39
SATB1-217ENST00000493952 CRYGBP07316 175 aa12.63□□□□□ -0.39
SATB1-217ENST00000493952 EGR2P11161 476 aaPredicted RBP12.63□□□□□ -0.39
SATB1-217ENST00000493952 NAT1P18440 290 aa12.63□□□□□ -0.39
SATB1-217ENST00000493952 RPL5P46777 297 aaKnown RBP12.63□□□□□ -0.39
SATB1-217ENST00000493952 LGALS7P47929 136 aa12.63□□□□□ -0.39
SATB1-217ENST00000493952 CRIP2P52943 208 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms