RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 GOSR2O14653 212 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 PFDN1O60925 122 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 CCNKO75909 580 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 IGKV1-39P01597 117 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 IGKV1D-39P04432 117 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 MSMBP08118 114 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 GIPP09681 153 aaPredicted RBP10.28□□□□□ -0.76
VPS52-220ENST00000493674 THBS3P49746 956 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 DCAF12L2Q5VW00 463 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 NCR3LG1Q68D85 454 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 SELENOHQ8IZQ5 122 aaKnown RBP10.28□□□□□ -0.76
VPS52-220ENST00000493674 LGI3Q8N145 548 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 OR13D1Q8NGV5 346 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 TMEM186Q96B77 213 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 PPP1R14BQ96C90 147 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 ADTRPQ96IZ2 230 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 S1PR3Q99500 378 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 REG4Q9BYZ8 158 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 ZNF436Q9C0F3 470 aaPredicted RBP10.28□□□□□ -0.76
VPS52-220ENST00000493674 RANGRFQ9HD47 186 aaPredicted RBP10.28□□□□□ -0.76
VPS52-220ENST00000493674 SIRT7Q9NRC8 400 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 ITGB1BP2Q9UKP3 347 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 TRAV20A0A0B4J274 112 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 B4DSR2 109 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 G3V3Q6 166 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 P0C879 139 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 CT45A6P0DMU7 189 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 CT45A5P0DMU8 189 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 CT45A7P0DMV0 189 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 RPA2P15927 270 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 KIR2DS2P43631 304 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 PRRX1P54821 245 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 LINC00205P59089 165 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 KLRD1Q13241 179 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 LDLRAD2Q5SZI1 272 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 PNKDQ8N490 385 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 ZNF383Q8NA42 475 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 OR10X1Q8NGY0 326 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 RBPMSQ93062 196 aaKnown RBP10.27□□□□□ -0.77
VPS52-220ENST00000493674 Q96MF0 132 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 FYTTD1Q96QD9 318 aaKnown RBP10.27□□□□□ -0.77
VPS52-220ENST00000493674 HEXA-AS1Q9H8Q6 139 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 AMMECR1Q9Y4X0 333 aaPredicted RBP10.27□□□□□ -0.77
VPS52-220ENST00000493674 CSPG4Q6UVK1 2322 aa10.27□□□□□ -0.77
VPS52-220ENST00000493674 PIGBOS1A0A0B4J2F0 54 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 A8MV72 311 aaPredicted RBP10.26□□□□□ -0.77
VPS52-220ENST00000493674 RNF223E7ERA6 249 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 BUB1B-PAK6H3BSN5 160 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 CCSO14618 274 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 TOR1AO14656 332 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 PLXNB1O43157 2135 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 RAMP3O60896 148 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 ADAP1O75689 374 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 TOX4O94842 621 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 COX7A1P24310 79 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 IL3RAP26951 378 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 CD83Q01151 205 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 PRB3Q04118 309 aaPredicted RBP10.26□□□□□ -0.77
VPS52-220ENST00000493674 ZNF816Q0VGE8 651 aaPredicted RBP10.26□□□□□ -0.77
VPS52-220ENST00000493674 IL15RAQ13261 267 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 NMSQ5H8A3 153 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 TMEM268Q5VZI3 342 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 LYZL2Q7Z4W2 148 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 SPAG16Q8N0X2 631 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 SLC35G3Q8N808 338 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 LINC01356Q8N9X3 169 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 UXS1Q8NBZ7 420 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 CD300LFQ8TDQ1 290 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 TCTEX1D2Q8WW35 142 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 NABP2Q9BQ15 211 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 PCGF1Q9BSM1 259 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 MRPL20Q9BYC9 149 aaKnown RBP10.26□□□□□ -0.77
VPS52-220ENST00000493674 TMED3Q9Y3Q3 217 aa10.26□□□□□ -0.77
VPS52-220ENST00000493674 TXNL1O43396 289 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 SIX6O95475 246 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 IGKV1-5P01602 117 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 SERPINE2P07093 398 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 GATA3P23771 443 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 UBE2E1P51965 193 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 RAP2BP61225 183 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 TAGLNQ01995 201 aaKnown RBP10.25□□□□□ -0.77
VPS52-220ENST00000493674 DIAPH2-AS1Q14236 149 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 GGNBP1Q5YKI7 109 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 OR5AN1Q8NGI8 311 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 LSM10Q969L4 123 aaKnown RBP10.25□□□□□ -0.77
VPS52-220ENST00000493674 WDR89Q96FK6 387 aaPredicted RBP10.25□□□□□ -0.77
VPS52-220ENST00000493674 AJUBAQ96IF1 538 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 OR10C1Q96KK4 312 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 PLEKHA2Q9HB19 425 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 LPAR2Q9HBW0 351 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 TEP1Q99973 2627 aaKnown RBP10.25□□□□□ -0.77
VPS52-220ENST00000493674 ACANP16112 2415 aa10.25□□□□□ -0.77
VPS52-220ENST00000493674 A0A1W2PPI3 338 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 MPTX1A8MV57 137 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 H0YJW9 148 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 S1PR2O95136 353 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 HOXB5P09067 269 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 IGHV4-31P0DP07 118 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 ZNF16P17020 682 aaPredicted RBP10.24□□□□□ -0.77
VPS52-220ENST00000493674 VDAC1P21796 283 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms