RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 SOX15O60248 233 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 CD3GP09693 182 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 RRASP10301 218 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 GADD45AP24522 165 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 RCN1Q15293 331 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 RAB11BQ15907 218 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 C19orf54Q5BKX5 351 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 FAM209BQ5JX69 171 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 OR10K2Q6IF99 312 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 OR4A4PQ8NGN8 299 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 OR10J5Q8NHC4 309 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 CASTOR1Q8WTX7 329 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 USMG5Q96IX5 58 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 FAM103A1Q9BTL3 118 aaKnown RBP8.92□□□□□ -0.98
COL6A3-213ENST00000493475 C11orf54Q9H0W9 315 aaPredicted RBP8.92□□□□□ -0.98
COL6A3-213ENST00000493475 TUBA4BQ9H853 241 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 SLC35D1Q9NTN3 355 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 PEMTQ9UBM1 199 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 AK3Q9UIJ7 227 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 FBXO7Q9Y3I1 522 aa8.92□□□□□ -0.98
COL6A3-213ENST00000493475 A8MZ25 164 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 TRDCB7Z8K6 153 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 PTGES3LE9PB15 166 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 M0R1X1 148 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 FCN1O00602 326 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 SLC17A2O00624 439 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 MPPED1O15442 326 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 SLC25A17O43808 307 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 ACTL6BO94805 426 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 IGLV1-51P01701 117 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 CDK1P06493 297 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 UCHL1P09936 223 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 IGHV4-30-4P0DP06 118 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 UNC119Q13432 240 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 P2RY14Q15391 338 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 VMA21Q3ZAQ7 101 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 LRRTM1Q86UE6 522 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 DRAXINQ8NBI3 349 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-213ENST00000493475 ADTRPQ96IZ2 230 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 HARBI1Q96MB7 349 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 AGMATQ9BSE5 352 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 NICN1Q9BSH3 213 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 Q9N2K0 584 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 TPSG1Q9NRR2 321 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 TPRKBQ9Y3C4 175 aa8.91□□□□□ -0.98
COL6A3-213ENST00000493475 TRIM64CA6NLI5 447 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 SHOXO15266 292 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 AIREO43918 545 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 DIRAS3O95661 229 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 IGKV1-16P04430 117 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 EGR2P11161 476 aaPredicted RBP8.9□□□□□ -0.98
COL6A3-213ENST00000493475 MAP2K4P45985 399 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 ARL6IP1Q15041 203 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 RPEL1Q2QD12 228 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 Q8N402 240 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 OR5T1Q8NG75 326 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 OR9G4Q8NGQ1 327 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 SNAPC3Q92966 411 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 TM2D3Q9BRN9 247 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 GINS4Q9BRT9 223 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 LPAR5Q9H1C0 372 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 COA4Q9NYJ1 87 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 RDH8Q9NYR8 311 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 OR1A1Q9P1Q5 309 aa8.9□□□□□ -0.98
COL6A3-213ENST00000493475 PEF1Q9UBV8 284 aaKnown RBP8.9□□□□□ -0.98
COL6A3-213ENST00000493475 ANKRD34BA5PLL1 514 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 PDCD5O14737 125 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 BET1O15155 118 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 SOCS1O15524 211 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 FABP7O15540 132 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 DENRO43583 198 aaKnown RBP8.89□□□□□ -0.99
COL6A3-213ENST00000493475 TUSC2O75896 110 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 BRI3O95415 125 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 GNAO1P09471 354 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 SCTP09683 121 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 HSMCR30P0CW71 290 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 TALDO1P37837 337 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 VEGFCP49767 419 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 LIPKQ5VXJ0 399 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 FAM89BQ8N5H3 189 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 OR2K2Q8NGT1 345 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 FBLIM1Q8WUP2 373 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 TMEM203Q969S6 136 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 RAB3CQ96E17 227 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 RBMXL1Q96E39 390 aaKnown RBP8.89□□□□□ -0.99
COL6A3-213ENST00000493475 OR2D2Q9H210 308 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 FKBP14Q9NWM8 211 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 GAB2Q9UQC2 676 aa8.89□□□□□ -0.99
COL6A3-213ENST00000493475 METTL21EPA6NDL7 271 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 JTBO76095 146 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 OR2A4O95047 310 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 CALRP27797 417 aaKnown RBP8.88□□□□□ -0.99
COL6A3-213ENST00000493475 QRFPP83859 136 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 INSL4Q14641 139 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 SSX1Q16384 188 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 OGFRL1Q5TC84 451 aaPredicted RBP8.88□□□□□ -0.99
COL6A3-213ENST00000493475 C5orf24Q7Z6I8 188 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 SLC25A42Q86VD7 318 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 ZNF383Q8NA42 475 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 FAM3DQ96BQ1 224 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms