RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 MICBQ29980 383 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF181Q2M3W8 571 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 TEX30Q5JUR7 227 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 RPL13AP3Q6NVV1 102 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 C16orf87Q6PH81 154 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 CD164L2Q6UWJ8 174 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 C17orf107Q6ZR85 190 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 CCDC121Q6ZUS5 278 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 GPR141Q7Z602 305 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 LAX1Q8IWV1 398 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 ENTHD1Q8IYW4 607 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 OR52I1Q8NGK6 324 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 OR2G2Q8NGZ5 317 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 RFESDQ8TAC1 157 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF671Q8TAW3 534 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 FNDC8Q8TC99 324 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 ITFG2Q969R8 447 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 PELI1Q96FA3 418 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 C4orf36Q96KX1 117 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 NOL4LQ96MY1 436 aaPredicted RBP2.18□□□□□ -2.06
PTCD3-218ENST00000493430 SPAG8Q99932 426 aaPredicted RBP2.18□□□□□ -2.06
PTCD3-218ENST00000493430 CITED1Q99966 193 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 GABARAPL3Q9BY60 117 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 NDEL1Q9GZM8 345 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 FAM192AQ9GZU8 254 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 PARP12Q9H0J9 701 aaKnown RBP2.18□□□□□ -2.06
PTCD3-218ENST00000493430 NEK6Q9HC98 313 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 NUFIP1Q9UHK0 495 aaKnown RBP2.18□□□□□ -2.06
PTCD3-218ENST00000493430 ATPIF1Q9UII2 106 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 KIF25Q9UIL4 384 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 VPREB3Q9UKI3 123 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 GSTK1Q9Y2Q3 226 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 AP3M1Q9Y2T2 418 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 AP4S1Q9Y587 144 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 R4GMQ9 66 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 V9GYS6 101 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 DNAH9Q9NYC9 4486 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 DNAH3Q8TD57 4116 aa2.18□□□□□ -2.06
PTCD3-218ENST00000493430 A0A1B0GVI7 797 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 WI2-2373I1.2A0A1W2PRP0 233 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 CLPSL1A2RUU4 121 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ARRDC5A6NEK1 342 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ERICH4A6NGS2 130 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ODF3BA8MYP8 253 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 PRSS46E5RG02 174 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 J3QRE1 110 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 PIN1P1O15428 100 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 SYT7O43581 403 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 OR2H2O95918 312 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 HAND1O96004 215 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 PAHP00439 452 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 CST4P01036 141 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 KRT8P05787 483 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 FCER2P06734 321 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 HCKP08631 526 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 LIMS3P0CW19 117 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 LIMS4P0CW20 117 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 IGLL1P15814 213 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ATF1P18846 271 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 SERPINA2P20848 420 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 PAICSP22234 425 aaKnown RBP2.17□□□□□ -2.06
PTCD3-218ENST00000493430 CCL1P22362 96 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 NFYBP25208 207 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 FASP25445 335 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 HTR1FP30939 366 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 SOX6P35712 828 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 EFNB2P52799 333 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 SSTP61278 116 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ACTA2P62736 377 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 RPL31P62899 125 aaKnown RBP2.17□□□□□ -2.06
PTCD3-218ENST00000493430 GNG3P63215 75 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ACTG2P63267 376 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ACTC1P68032 377 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ACTA1P68133 377 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 RIPPLY1Q0D2K3 151 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 MADCAM1Q13477 382 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 CDK5R1Q15078 307 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 RCN1Q15293 331 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 GRK1Q15835 563 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 MOGQ16653 247 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 C17orf58Q2M2W7 97 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 LRRC75BQ2VPJ9 315 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF829Q3KNS6 432 aaPredicted RBP2.17□□□□□ -2.06
PTCD3-218ENST00000493430 CEACAM21Q3KPI0 293 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 TIMM50Q3ZCQ8 353 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 DNAL1Q4LDG9 190 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 LRRC10Q5BKY1 277 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 NHLRC3Q5JS37 347 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 NXNL2Q5VZ03 156 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 TMEM42Q69YG0 159 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 Q6P435 159 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 SLC36A1Q7Z2H8 476 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 TRAPPC6BQ86SZ2 158 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF679Q8IYX0 411 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 ZNF676Q8N7Q3 588 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 OR52H1Q8NGJ2 320 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 OR4P4Q8NGL7 312 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 OR56B4Q8NH76 319 aa2.17□□□□□ -2.06
PTCD3-218ENST00000493430 TSEN15Q8WW01 171 aaKnown RBP2.17□□□□□ -2.06
PTCD3-218ENST00000493430 CYGBQ8WWM9 190 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms