RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 UCP3P55916 312 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 DEFA1P59665 94 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 DEFA3P59666 94 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 ASAH1Q13510 395 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 HES1Q14469 280 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 HNF4GQ14541 408 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 LY6EQ16553 131 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 FAM71F2Q6NXP2 309 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 CMTM1Q8IZ96 169 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 ZNF383Q8NA42 475 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 POC5Q8NA72 575 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 OR51H1Q8NH63 302 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 ZFAND1Q8TCF1 268 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 GAB2Q9UQC2 676 aa13.83□□□□□ -0.2
LIME1-208ENST00000493265 C14orf166Q9Y224 244 aaKnown RBP13.83□□□□□ -0.2
LIME1-208ENST00000493265 FAM240BA0A1B0GVZ2 78 aa13.82□□□□□ -0.2
LIME1-208ENST00000493265 LINC00473A8K010 186 aa13.82□□□□□ -0.2
LIME1-208ENST00000493265 HOXA3O43365 443 aaPredicted RBP13.82□□□□□ -0.2
LIME1-208ENST00000493265 SNRNP70P08621 437 aaKnown RBP13.82□□□□□ -0.2
LIME1-208ENST00000493265 DUTP33316 252 aaKnown RBP13.82□□□□□ -0.2
LIME1-208ENST00000493265 ECI1P42126 302 aa13.82□□□□□ -0.2
LIME1-208ENST00000493265 RPL30P62888 115 aaKnown RBP13.82□□□□□ -0.2
LIME1-208ENST00000493265 Q6YL49 198 aa13.82□□□□□ -0.2
LIME1-208ENST00000493265 KCTD9Q7L273 389 aa13.82□□□□□ -0.2
LIME1-208ENST00000493265 TMED4Q7Z7H5 227 aa13.82□□□□□ -0.2
LIME1-208ENST00000493265 ZBTB34Q8NCN2 500 aa13.82□□□□□ -0.2
LIME1-208ENST00000493265 BVESQ8NE79 360 aa13.82□□□□□ -0.2
LIME1-208ENST00000493265 CFHR4Q92496 578 aa13.82□□□□□ -0.2
LIME1-208ENST00000493265 AKR1E2Q96JD6 320 aa13.82□□□□□ -0.2
LIME1-208ENST00000493265 VSIG4Q9Y279 399 aa13.82□□□□□ -0.2
LIME1-208ENST00000493265 PGLYRP1O75594 196 aaPredicted RBP13.81□□□□□ -0.2
LIME1-208ENST00000493265 IGKV1D-33P01593 117 aa13.81□□□□□ -0.2
LIME1-208ENST00000493265 IGKV1-33P01594 117 aa13.81□□□□□ -0.2
LIME1-208ENST00000493265 APOA2P02652 100 aa13.81□□□□□ -0.2
LIME1-208ENST00000493265 CTSDP07339 412 aaPredicted RBP13.81□□□□□ -0.2
LIME1-208ENST00000493265 S100GP29377 79 aa13.81□□□□□ -0.2
LIME1-208ENST00000493265 THBS3P49746 956 aa13.81□□□□□ -0.2
LIME1-208ENST00000493265 PIGPP57054 158 aa13.81□□□□□ -0.2
LIME1-208ENST00000493265 RBMS2Q15434 407 aaKnown RBP13.81□□□□□ -0.2
LIME1-208ENST00000493265 ZNF418Q8TF45 676 aaPredicted RBP13.81□□□□□ -0.2
LIME1-208ENST00000493265 DPAGT1Q9H3H5 408 aa13.81□□□□□ -0.2
LIME1-208ENST00000493265 SLC2A9Q9NRM0 540 aa13.81□□□□□ -0.2
LIME1-208ENST00000493265 SLC35D1Q9NTN3 355 aa13.81□□□□□ -0.2
LIME1-208ENST00000493265 COPZ2Q9P299 210 aa13.81□□□□□ -0.2
LIME1-208ENST00000493265 GPR132Q9UNW8 380 aa13.81□□□□□ -0.2
LIME1-208ENST00000493265 BTBD17A6NE02 478 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 NDUFB6O95139 128 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 AKR1C4P17516 323 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 IER3P46695 156 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 DCTN2Q13561 401 aaKnown RBP13.8□□□□□ -0.2
LIME1-208ENST00000493265 SURF2Q15527 256 aaPredicted RBP13.8□□□□□ -0.2
LIME1-208ENST00000493265 MSMO1Q15800 293 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 FBLN7Q53RD9 439 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 ZNF66Q6ZN08 573 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 TBC1D26Q86UD7 250 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 TMEM219Q86XT9 240 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 ADAD2Q8NCV1 583 aaKnown RBP13.8□□□□□ -0.2
LIME1-208ENST00000493265 ENKURQ8TC29 256 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 ADTRPQ96IZ2 230 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 SCGB3A2Q96PL1 93 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 HSD17B10Q99714 261 aaKnown RBP13.8□□□□□ -0.2
LIME1-208ENST00000493265 SLC25A21Q9BQT8 299 aaPredicted RBP13.8□□□□□ -0.2
LIME1-208ENST00000493265 RTBDNQ9BSG5 229 aaPredicted RBP13.8□□□□□ -0.2
LIME1-208ENST00000493265 C5orf66Q9H5L9 145 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 FLVCR2Q9UPI3 526 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 PRELID3BQ9Y3B1 194 aa13.8□□□□□ -0.2
LIME1-208ENST00000493265 VGLL3A8MV65 326 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 H0YJW9 148 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 ARPC1BO15143 372 aaKnown RBP13.79□□□□□ -0.2
LIME1-208ENST00000493265 FCGR3BO75015 233 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 PEX14O75381 377 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 VENTXO95231 258 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 CD1BP29016 333 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 CATR1Q13166 79 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 EIF4EBP1Q13541 118 aaPredicted RBP13.79□□□□□ -0.2
LIME1-208ENST00000493265 ZDHHC22Q8N966 263 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 CCDC71LQ8N9Z2 235 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 PIFOQ8TCI5 191 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 SSMEM1Q8WWF3 244 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 ZNF486Q96H40 463 aaPredicted RBP13.79□□□□□ -0.2
LIME1-208ENST00000493265 WASHC3Q9Y3C0 194 aa13.79□□□□□ -0.2
LIME1-208ENST00000493265 TRAV6A0A075B6T7 132 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 TEX13DA0A0J9YY54 714 aaPredicted RBP13.78□□□□□ -0.2
LIME1-208ENST00000493265 DNAJC9-AS1A6NH13 148 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 MPPED1O15442 326 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 FAM106CPP0CH98 169 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 TMEM11P17152 192 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 SLC6A1P30531 599 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 MC5RP33032 325 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 CBX3Q13185 183 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 RTL8BQ17RB0 113 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 NRARPQ7Z6K4 114 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 OR5AN1Q8NGI8 311 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 PRDM13Q9H4Q3 707 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 BEX1Q9HBH7 125 aa13.78□□□□□ -0.2
LIME1-208ENST00000493265 CRYZL1O95825 349 aa13.77□□□□□ -0.21
LIME1-208ENST00000493265 TCRBP04435 133 aa13.77□□□□□ -0.21
LIME1-208ENST00000493265 DYNLT3P51808 116 aa13.77□□□□□ -0.21
LIME1-208ENST00000493265 HABP2Q14520 560 aaPredicted RBP13.77□□□□□ -0.21
LIME1-208ENST00000493265 AANATQ16613 207 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms