RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 FHL3Q13643 280 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 KIAA0141Q14154 515 aaPredicted RBP11.67□□□□□ -0.54
TOM1-215ENST00000491987 C19orf54Q5BKX5 351 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 DEFB121Q5J5C9 76 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 PDPNQ86YL7 162 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 OR11H1Q8NG94 326 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 CASTOR1Q8WTX7 329 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 TSNAXQ99598 290 aaKnown RBP11.67□□□□□ -0.54
TOM1-215ENST00000491987 RNF5Q99942 180 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 GINS4Q9BRT9 223 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 FAM103A1Q9BTL3 118 aaKnown RBP11.67□□□□□ -0.54
TOM1-215ENST00000491987 TPSG1Q9NRR2 321 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 SLC35D1Q9NTN3 355 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 SDHAF2Q9NX18 166 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 FOXA2Q9Y261 457 aaPredicted RBP11.67□□□□□ -0.54
TOM1-215ENST00000491987 VSIG4Q9Y279 399 aa11.67□□□□□ -0.54
TOM1-215ENST00000491987 RRP15Q9Y3B9 282 aaKnown RBP11.67□□□□□ -0.54
TOM1-215ENST00000491987 IGKV1D-8A0A087WSZ0 117 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 I3L521 148 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 SPDEFO95238 335 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 DIRAS3O95661 229 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 GNB1P62873 340 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 MXD1Q05195 221 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 CDNFQ49AH0 187 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 SFXN4Q6P4A7 337 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 TPRA1Q86W33 373 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 PPP1R27Q86WC6 154 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 LGALS14Q8TCE9 139 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 FLYWCH2Q96CP2 140 aaKnown RBP11.66□□□□□ -0.54
TOM1-215ENST00000491987 C5orf30Q96GV9 206 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 RNF167Q9H6Y7 350 aa11.66□□□□□ -0.54
TOM1-215ENST00000491987 RBM7Q9Y580 266 aaKnown RBP11.66□□□□□ -0.54
TOM1-215ENST00000491987 LOC100506127A0A0U1RQW1 187 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 SEC14L6B5MCN3 397 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 SLC25A17O43808 307 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 CLEC2LP0C7M8 214 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 DTYMKP23919 212 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 SDC2P34741 201 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 DGCR2P98153 550 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 RUNX1Q01196 453 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 TMEM267Q0VDI3 215 aaPredicted RBP11.65□□□□□ -0.54
TOM1-215ENST00000491987 ARL6IP1Q15041 203 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 NEDD8Q15843 81 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 C9orf66Q5T8R8 295 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 ASPHD1Q5U4P2 390 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 UNQ5815/PRO19632Q6UWF5 114 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 Q6ZS49 121 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 TCTEX1D1Q8N7M0 179 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 OR1N2Q8NGR9 330 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.65□□□□□ -0.54
TOM1-215ENST00000491987 NUBP2Q9Y5Y2 271 aa11.65□□□□□ -0.54
TOM1-215ENST00000491987 ZNF616Q08AN1 781 aa11.64□□□□□ -0.55
TOM1-215ENST00000491987 SRSF7Q16629 238 aaKnown RBP eCLIP11.64□□□□□ -0.55
TOM1-215ENST00000491987 ACTBL2Q562R1 376 aa11.64□□□□□ -0.55
TOM1-215ENST00000491987 HACD4Q5VWC8 232 aa11.64□□□□□ -0.55
TOM1-215ENST00000491987 ZNF562Q6V9R5 426 aa11.64□□□□□ -0.55
TOM1-215ENST00000491987 H1FOOQ8IZA3 346 aaPredicted RBP11.64□□□□□ -0.55
TOM1-215ENST00000491987 BVESQ8NE79 360 aa11.64□□□□□ -0.55
TOM1-215ENST00000491987 LFNGQ8NES3 379 aa11.64□□□□□ -0.55
TOM1-215ENST00000491987 GRPEL2Q8TAA5 225 aa11.64□□□□□ -0.55
TOM1-215ENST00000491987 NUDCD2Q8WVJ2 157 aa11.64□□□□□ -0.55
TOM1-215ENST00000491987 ARPC1AQ92747 370 aa11.64□□□□□ -0.55
TOM1-215ENST00000491987 ST6GALNAC5Q9BVH7 336 aa11.64□□□□□ -0.55
TOM1-215ENST00000491987 ALX4Q9H161 411 aaPredicted RBP11.64□□□□□ -0.55
TOM1-215ENST00000491987 TMEM235A6NFC5 223 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 J3QRK9 145 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 ARPC1BO15143 372 aaKnown RBP11.63□□□□□ -0.55
TOM1-215ENST00000491987 IGLV2-23P01705 113 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 OR8U8P0C7N1 319 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 CD36P16671 472 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 CBX3Q13185 183 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 KCTD21Q4G0X4 260 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 AKIRIN2Q53H80 203 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 HARBI1Q96MB7 349 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 MS4A10Q96PG2 267 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 CENPOQ9BU64 300 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 RHBDL2Q9NX52 303 aa11.63□□□□□ -0.55
TOM1-215ENST00000491987 ZMAT5Q9UDW3 170 aaKnown RBP11.63□□□□□ -0.55
TOM1-215ENST00000491987 SCGNO76038 276 aa11.62□□□□□ -0.55
TOM1-215ENST00000491987 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
TOM1-215ENST00000491987 TPPP2P59282 170 aa11.62□□□□□ -0.55
TOM1-215ENST00000491987 GNG2P59768 71 aa11.62□□□□□ -0.55
TOM1-215ENST00000491987 FXYD3Q14802 87 aa11.62□□□□□ -0.55
TOM1-215ENST00000491987 RTL8BQ17RB0 113 aa11.62□□□□□ -0.55
TOM1-215ENST00000491987 ZNF260Q3ZCT1 412 aa11.62□□□□□ -0.55
TOM1-215ENST00000491987 TMEM177Q53S58 311 aa11.62□□□□□ -0.55
TOM1-215ENST00000491987 PYHIN1Q6K0P9 492 aa11.62□□□□□ -0.55
TOM1-215ENST00000491987 SHOXO15266 292 aa11.61□□□□□ -0.55
TOM1-215ENST00000491987 SSX5O60225 188 aa11.61□□□□□ -0.55
TOM1-215ENST00000491987 RAMP3O60896 148 aa11.61□□□□□ -0.55
TOM1-215ENST00000491987 CNIH1O95406 144 aa11.61□□□□□ -0.55
TOM1-215ENST00000491987 CRYGBP07316 175 aa11.61□□□□□ -0.55
TOM1-215ENST00000491987 LGALS1P09382 135 aaKnown RBP11.61□□□□□ -0.55
TOM1-215ENST00000491987 CD40LGP29965 261 aa11.61□□□□□ -0.55
TOM1-215ENST00000491987 DUTP33316 252 aaKnown RBP11.61□□□□□ -0.55
TOM1-215ENST00000491987 ECI1P42126 302 aa11.61□□□□□ -0.55
TOM1-215ENST00000491987 LGALS7P47929 136 aa11.61□□□□□ -0.55
TOM1-215ENST00000491987 SLURP1P55000 103 aa11.61□□□□□ -0.55
TOM1-215ENST00000491987 SSBP2P81877 361 aaPredicted RBP11.61□□□□□ -0.55
TOM1-215ENST00000491987 PITPNAQ00169 270 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms