RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TSNAXQ99598 290 aaKnown RBP24.42■■□□□ 1.5
LDB1-204ENST00000490751 DAPK2Q9UIK4 370 aa24.42■■□□□ 1.5
LDB1-204ENST00000490751 VSIG4Q9Y279 399 aa24.42■■□□□ 1.5
LDB1-204ENST00000490751 SNRPBP14678 240 aaKnown RBP24.41■■□□□ 1.5
LDB1-204ENST00000490751 RAB9AP51151 201 aa24.41■■□□□ 1.5
LDB1-204ENST00000490751 GINS4Q9BRT9 223 aa24.41■■□□□ 1.5
LDB1-204ENST00000490751 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP24.41■■□□□ 1.5
LDB1-204ENST00000490751 SLC35D1Q9NTN3 355 aa24.41■■□□□ 1.5
LDB1-204ENST00000490751 SDHAF2Q9NX18 166 aa24.41■■□□□ 1.5
LDB1-204ENST00000490751 GAB2Q9UQC2 676 aa24.41■■□□□ 1.5
LDB1-204ENST00000490751 RRP15Q9Y3B9 282 aaKnown RBP24.41■■□□□ 1.5
LDB1-204ENST00000490751 SOX15O60248 233 aa24.4■■□□□ 1.5
LDB1-204ENST00000490751 SPDEFO95238 335 aa24.4■■□□□ 1.5
LDB1-204ENST00000490751 SRSF7Q16629 238 aaKnown RBP eCLIP24.4■■□□□ 1.52e-8■■■□□ 15.5
LDB1-204ENST00000490751 CDNFQ49AH0 187 aa24.4■■□□□ 1.5
LDB1-204ENST00000490751 Q6ZS49 121 aa24.4■■□□□ 1.5
LDB1-204ENST00000490751 FLYWCH2Q96CP2 140 aaKnown RBP24.4■■□□□ 1.5
LDB1-204ENST00000490751 OR5B12Q96R08 314 aa24.4■■□□□ 1.5
LDB1-204ENST00000490751 FAM103A1Q9BTL3 118 aaKnown RBP24.4■■□□□ 1.5
LDB1-204ENST00000490751 FOXA2Q9Y261 457 aaPredicted RBP24.4■■□□□ 1.5
LDB1-204ENST00000490751 IGKV1D-8A0A087WSZ0 117 aa24.39■■□□□ 1.49
LDB1-204ENST00000490751 CA2P00918 260 aa24.39■■□□□ 1.49
LDB1-204ENST00000490751 EGR2P11161 476 aaPredicted RBP24.39■■□□□ 1.49
LDB1-204ENST00000490751 LUMP51884 338 aaPredicted RBP24.39■■□□□ 1.49
LDB1-204ENST00000490751 SFXN4Q6P4A7 337 aa24.39■■□□□ 1.49
LDB1-204ENST00000490751 TCTEX1D1Q8N7M0 179 aa24.39■■□□□ 1.49
LDB1-204ENST00000490751 C5orf30Q96GV9 206 aa24.39■■□□□ 1.49
LDB1-204ENST00000490751 RBM7Q9Y580 266 aaKnown RBP24.39■■□□□ 1.49
LDB1-204ENST00000490751 NUBP2Q9Y5Y2 271 aa24.39■■□□□ 1.49
LDB1-204ENST00000490751 I3L521 148 aa24.38■■□□□ 1.49
LDB1-204ENST00000490751 DTYMKP23919 212 aa24.38■■□□□ 1.49
LDB1-204ENST00000490751 SDC2P34741 201 aa24.38■■□□□ 1.49
LDB1-204ENST00000490751 TMEM267Q0VDI3 215 aaPredicted RBP24.38■■□□□ 1.49
LDB1-204ENST00000490751 DEFB121Q5J5C9 76 aa24.38■■□□□ 1.49
LDB1-204ENST00000490751 ZNF562Q6V9R5 426 aa24.38■■□□□ 1.49
LDB1-204ENST00000490751 PPP1R27Q86WC6 154 aa24.38■■□□□ 1.49
LDB1-204ENST00000490751 LGALS14Q8TCE9 139 aa24.38■■□□□ 1.49
LDB1-204ENST00000490751 TPSG1Q9NRR2 321 aa24.38■■□□□ 1.49
LDB1-204ENST00000490751 SLC25A17O43808 307 aa24.37■■□□□ 1.49
LDB1-204ENST00000490751 GNB1P62873 340 aa24.37■■□□□ 1.49
LDB1-204ENST00000490751 RUNX1Q01196 453 aa24.37■■□□□ 1.49
LDB1-204ENST00000490751 NEDD8Q15843 81 aa24.37■■□□□ 1.49
LDB1-204ENST00000490751 OR1N2Q8NGR9 330 aa24.37■■□□□ 1.49
LDB1-204ENST00000490751 CASTOR1Q8WTX7 329 aa24.37■■□□□ 1.49
LDB1-204ENST00000490751 CENPOQ9BU64 300 aa24.37■■□□□ 1.49
LDB1-204ENST00000490751 RNF167Q9H6Y7 350 aa24.37■■□□□ 1.49
LDB1-204ENST00000490751 CLEC2LP0C7M8 214 aa24.36■■□□□ 1.49
LDB1-204ENST00000490751 MXD1Q05195 221 aa24.36■■□□□ 1.49
LDB1-204ENST00000490751 KCTD21Q4G0X4 260 aa24.36■■□□□ 1.49
LDB1-204ENST00000490751 C9orf66Q5T8R8 295 aa24.36■■□□□ 1.49
LDB1-204ENST00000490751 HACD4Q5VWC8 232 aa24.36■■□□□ 1.49
LDB1-204ENST00000490751 UNQ5815/PRO19632Q6UWF5 114 aa24.36■■□□□ 1.49
LDB1-204ENST00000490751 H1FOOQ8IZA3 346 aaPredicted RBP24.36■■□□□ 1.49
LDB1-204ENST00000490751 LOC100506127A0A0U1RQW1 187 aa24.35■■□□□ 1.49
LDB1-204ENST00000490751 SEC14L6B5MCN3 397 aa24.35■■□□□ 1.49
LDB1-204ENST00000490751 SCGNO76038 276 aa24.35■■□□□ 1.49
LDB1-204ENST00000490751 OR8U8P0C7N1 319 aa24.35■■□□□ 1.49
LDB1-204ENST00000490751 DGCR2P98153 550 aa24.35■■□□□ 1.49
LDB1-204ENST00000490751 ZNF616Q08AN1 781 aa24.35■■□□□ 1.49
LDB1-204ENST00000490751 ASPHD1Q5U4P2 390 aa24.35■■□□□ 1.49
LDB1-204ENST00000490751 LFNGQ8NES3 379 aa24.35■■□□□ 1.49
LDB1-204ENST00000490751 NUDCD2Q8WVJ2 157 aa24.35■■□□□ 1.49
LDB1-204ENST00000490751 ZMAT5Q9UDW3 170 aaKnown RBP24.35■■□□□ 1.49
LDB1-204ENST00000490751 TMEM235A6NFC5 223 aa24.34■■□□□ 1.49
LDB1-204ENST00000490751 AKIRIN2Q53H80 203 aa24.34■■□□□ 1.49
LDB1-204ENST00000490751 ACTBL2Q562R1 376 aa24.34■■□□□ 1.49
LDB1-204ENST00000490751 ARPC1AQ92747 370 aa24.34■■□□□ 1.49
LDB1-204ENST00000490751 ST6GALNAC5Q9BVH7 336 aa24.34■■□□□ 1.49
LDB1-204ENST00000490751 IGLV2-23P01705 113 aa24.33■■□□□ 1.49
LDB1-204ENST00000490751 CD36P16671 472 aa24.33■■□□□ 1.49
LDB1-204ENST00000490751 PYHIN1Q6K0P9 492 aa24.33■■□□□ 1.49
LDB1-204ENST00000490751 BVESQ8NE79 360 aa24.33■■□□□ 1.49
LDB1-204ENST00000490751 HARBI1Q96MB7 349 aa24.33■■□□□ 1.49
LDB1-204ENST00000490751 ALX4Q9H161 411 aaPredicted RBP24.33■■□□□ 1.49
LDB1-204ENST00000490751 RHBDL2Q9NX52 303 aa24.33■■□□□ 1.49
LDB1-204ENST00000490751 LGALS7P47929 136 aa24.32■■□□□ 1.48
LDB1-204ENST00000490751 TAGLNQ01995 201 aaKnown RBP24.32■■□□□ 1.48
LDB1-204ENST00000490751 CBX3Q13185 183 aa24.32■■□□□ 1.48
LDB1-204ENST00000490751 FXYD3Q14802 87 aa24.32■■□□□ 1.48
LDB1-204ENST00000490751 ZNF260Q3ZCT1 412 aa24.32■■□□□ 1.48
LDB1-204ENST00000490751 GRPEL2Q8TAA5 225 aa24.32■■□□□ 1.48
LDB1-204ENST00000490751 DCSTAMPQ9H295 470 aa24.32■■□□□ 1.48
LDB1-204ENST00000490751 ARPC1BO15143 372 aaKnown RBP24.31■■□□□ 1.48
LDB1-204ENST00000490751 GNG2P59768 71 aa24.31■■□□□ 1.48
LDB1-204ENST00000490751 PITPNAQ00169 270 aa24.31■■□□□ 1.48
LDB1-204ENST00000490751 RTL8BQ17RB0 113 aa24.31■■□□□ 1.48
LDB1-204ENST00000490751 SHOXO15266 292 aa24.3■■□□□ 1.48
LDB1-204ENST00000490751 RAMP3O60896 148 aa24.3■■□□□ 1.48
LDB1-204ENST00000490751 TMEM177Q53S58 311 aa24.3■■□□□ 1.48
LDB1-204ENST00000490751 OR5H6Q8NGV6 325 aa24.3■■□□□ 1.48
LDB1-204ENST00000490751 ADTRPQ96IZ2 230 aa24.3■■□□□ 1.48
LDB1-204ENST00000490751 MS4A10Q96PG2 267 aa24.3■■□□□ 1.48
LDB1-204ENST00000490751 J3QRK9 145 aa24.29■■□□□ 1.48
LDB1-204ENST00000490751 CRYGBP07316 175 aa24.29■■□□□ 1.48
LDB1-204ENST00000490751 LGALS1P09382 135 aaKnown RBP24.29■■□□□ 1.48
LDB1-204ENST00000490751 CTXN2P0C2S0 81 aa24.29■■□□□ 1.48
LDB1-204ENST00000490751 RRASP10301 218 aa24.29■■□□□ 1.48
LDB1-204ENST00000490751 DUTP33316 252 aaKnown RBP24.29■■□□□ 1.48
LDB1-204ENST00000490751 SSBP2P81877 361 aaPredicted RBP24.29■■□□□ 1.48
LDB1-204ENST00000490751 PJVKQ0ZLH3 352 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms