RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 IGKV1D-13A0A0B4J2D9 117 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 NUDT19A8MXV4 375 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 RRP9O43818 475 aaKnown RBP14.16□□□□□ -0.14
COL9A3-214ENST00000490398 IGKV1-13P0DP09 117 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 CD33P20138 364 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 PSMB8P28062 276 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 THBS3P49746 956 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 VBP1P61758 197 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 CX3CL1P78423 397 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 FOXE3Q13461 319 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 KIAA0141Q14154 515 aaPredicted RBP14.16□□□□□ -0.14
COL9A3-214ENST00000490398 C19orf54Q5BKX5 351 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 COMMD1Q8N668 190 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.16□□□□□ -0.14
COL9A3-214ENST00000490398 FAM103A1Q9BTL3 118 aaKnown RBP14.16□□□□□ -0.14
COL9A3-214ENST00000490398 DCSTAMPQ9H295 470 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 AUNIPQ9H7T9 357 aa14.16□□□□□ -0.14
COL9A3-214ENST00000490398 TRAV41A0A0B4J266 112 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 LINC00473A8K010 186 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 SOX15O60248 233 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 RBBP9O75884 186 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 SCGNO76038 276 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 IGLV2-14P01704 120 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 IGLV2-23P01705 113 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 RPS16P62249 146 aaKnown RBP14.15□□□□□ -0.14
COL9A3-214ENST00000490398 SSBP2P81877 361 aaPredicted RBP14.15□□□□□ -0.14
COL9A3-214ENST00000490398 PDPNQ86YL7 162 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 ZNF695Q8IW36 515 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 BVESQ8NE79 360 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 CASTOR1Q8WTX7 329 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 RAX2Q96IS3 184 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 METTL1Q9UBP6 276 aaKnown RBP14.15□□□□□ -0.14
COL9A3-214ENST00000490398 ANXA10Q9UJ72 324 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 ZNF580Q9UK33 172 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 RBM7Q9Y580 266 aaKnown RBP14.15□□□□□ -0.14
COL9A3-214ENST00000490398 A3GALT2U3KPV4 340 aa14.15□□□□□ -0.14
COL9A3-214ENST00000490398 MEIS3P1A6NDR6 274 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 SRRM4A7MD48 611 aaKnown RBP14.14□□□□□ -0.15
COL9A3-214ENST00000490398 SLC25A17O43808 307 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 CA2P00918 260 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 IGLV1-40P01703 118 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 APOA2P02652 100 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 ELANEP08246 267 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 DUTP33316 252 aaKnown RBP14.14□□□□□ -0.15
COL9A3-214ENST00000490398 RPL30P62888 115 aaKnown RBP14.14□□□□□ -0.15
COL9A3-214ENST00000490398 PITPNAQ00169 270 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 PJVKQ0ZLH3 352 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 PLGLAQ15195 96 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 ECSCRQ19T08 205 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 CXorf66Q5JRM2 361 aaPredicted RBP14.14□□□□□ -0.15
COL9A3-214ENST00000490398 CNIH2Q6PI25 160 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 MINDY2Q8NBR6 621 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 DDB2Q92466 427 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 P2RX4Q99571 388 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 RNF5Q99942 180 aa14.14□□□□□ -0.15
COL9A3-214ENST00000490398 ARPC1BO15143 372 aaKnown RBP14.13□□□□□ -0.15
COL9A3-214ENST00000490398 HLA-DQB1P01920 261 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 CRYGBP07316 175 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 MRGPRG-AS1Q2M3A8 158 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 FOXB2Q5VYV0 432 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 ZNF660Q6AZW8 331 aaPredicted RBP14.13□□□□□ -0.15
COL9A3-214ENST00000490398 HOGA1Q86XE5 327 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 SAMD12Q8N8I0 201 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 MYOZ3Q8TDC0 251 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 SNAPC3Q92966 411 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 SLC25A46Q96AG3 418 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 FLYWCH2Q96CP2 140 aaKnown RBP14.13□□□□□ -0.15
COL9A3-214ENST00000490398 GPHA2Q96T91 129 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 GON7Q9BXV9 100 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 GNB4Q9HAV0 340 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 OR2W1Q9Y3N9 320 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 NUBP2Q9Y5Y2 271 aa14.13□□□□□ -0.15
COL9A3-214ENST00000490398 A0A0A6YYH2 397 aa14.12□□□□□ -0.15
COL9A3-214ENST00000490398 A6NJ64 397 aa14.12□□□□□ -0.15
COL9A3-214ENST00000490398 TUSC2O75896 110 aa14.12□□□□□ -0.15
COL9A3-214ENST00000490398 EIF4EP06730 217 aaKnown RBP14.12□□□□□ -0.15
COL9A3-214ENST00000490398 CDX1P47902 265 aaPredicted RBP14.12□□□□□ -0.15
COL9A3-214ENST00000490398 CRIP2P52943 208 aaPredicted RBP14.12□□□□□ -0.15
COL9A3-214ENST00000490398 BEST4Q8NFU0 473 aa14.12□□□□□ -0.15
COL9A3-214ENST00000490398 TSNAXQ99598 290 aaKnown RBP14.12□□□□□ -0.15
COL9A3-214ENST00000490398 DIABLOQ9NR28 239 aa14.12□□□□□ -0.15
COL9A3-214ENST00000490398 XRCC3O43542 346 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 CTXN2P0C2S0 81 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 OR5H8P0DN80 308 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 MYCNOSP40205 109 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 LUMP51884 338 aaPredicted RBP14.11□□□□□ -0.15
COL9A3-214ENST00000490398 TMEM177Q53S58 311 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 UBE2NLQ5JXB2 153 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 CROCCP3Q8IVE0 287 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 ZNF645Q8N7E2 425 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 ZNF491Q8N8L2 437 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 ABHD5Q8WTS1 349 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 HARBI1Q96MB7 349 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 OR5B12Q96R08 314 aa14.11□□□□□ -0.15
COL9A3-214ENST00000490398 A0A1W2PN81 502 aa14.1□□□□□ -0.15
COL9A3-214ENST00000490398 CCL24O00175 119 aa14.1□□□□□ -0.15
COL9A3-214ENST00000490398 TMEM127O75204 238 aa14.1□□□□□ -0.15
COL9A3-214ENST00000490398 SPDEFO95238 335 aa14.1□□□□□ -0.15
COL9A3-214ENST00000490398 AADACP22760 399 aa14.1□□□□□ -0.15
COL9A3-214ENST00000490398 CHRNA7P36544 502 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms