RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 NCBP2LA6PVI3 153 aaKnown RBP8.68□□□□□ -1.02
VPS13D-210ENST00000489961 FGF16O43320 207 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 RAB3DO95716 219 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 RRASP10301 218 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 MEF2DQ14814 521 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 RTL8BQ17RB0 113 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 ARSJQ5FYB0 599 aaPredicted RBP8.68□□□□□ -1.02
VPS13D-210ENST00000489961 STEAP1BQ6NZ63 245 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 PDPNQ86YL7 162 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 Q8N402 240 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 ARRDC1Q8N5I2 433 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 Q8N6K4 173 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 ZNF383Q8NA42 475 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 ZBTB34Q8NCN2 500 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 OR2T6Q8NHC8 308 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 TAF15Q92804 592 aaKnown RBP eCLIP8.68□□□□□ -1.02
VPS13D-210ENST00000489961 C5orf30Q96GV9 206 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 HSD17B10Q99714 261 aaKnown RBP8.68□□□□□ -1.02
VPS13D-210ENST00000489961 THAP7Q9BT49 309 aaPredicted RBP8.68□□□□□ -1.02
VPS13D-210ENST00000489961 C16orf95Q9H693 158 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 CCL28Q9NRJ3 127 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 SLC35D1Q9NTN3 355 aa8.68□□□□□ -1.02
VPS13D-210ENST00000489961 CLPSL1A2RUU4 121 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 CD74P04233 296 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 AKAIN1P0CW23 69 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 DUTP33316 252 aaKnown RBP8.67□□□□□ -1.02
VPS13D-210ENST00000489961 COMPP49747 757 aaPredicted RBP8.67□□□□□ -1.02
VPS13D-210ENST00000489961 AP3S2P59780 193 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 MMDQ15546 238 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 ZNF79Q15937 498 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 AWAT1Q58HT5 328 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 LPCAT3Q6P1A2 487 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 C11orf88Q6PI97 169 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 C12orf54Q6X4T0 127 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 ZNF66Q6ZN08 573 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 KCTD9Q7L273 389 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 C5orf56Q8N8D9 126 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 RNF5Q99942 180 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 RASL11BQ9BPW5 248 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 TINAGL1Q9GZM7 467 aaPredicted RBP8.67□□□□□ -1.02
VPS13D-210ENST00000489961 PTTG2Q9NZH5 202 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 KIAA1456Q9P272 454 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 PRELID3BQ9Y3B1 194 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 MMP24Q9Y5R2 645 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 ATRQ13535 2644 aa8.67□□□□□ -1.02
VPS13D-210ENST00000489961 ANKRD20A5PA0PJZ0 165 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 LINC00473A8K010 186 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 DISC1C4P0D8 188 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 NBR2O15453 112 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 IGLV2-14P01704 120 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 AMY2AP04746 511 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 MDKP21741 143 aaPredicted RBP8.66□□□□□ -1.02
VPS13D-210ENST00000489961 S100GP29377 79 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 GNRHRP30968 328 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 FAUP35544 74 aaKnown RBP8.66□□□□□ -1.02
VPS13D-210ENST00000489961 UCP3P55916 312 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 LINC00205P59089 165 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 RPS16P62249 146 aaKnown RBP8.66□□□□□ -1.02
VPS13D-210ENST00000489961 BLCAPP62952 87 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 ZNF45Q02386 682 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 CATR1Q13166 79 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 ABCA11PQ4W5N1 156 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 LINC00299Q6ZSB3 139 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 CMTM1Q8IZ96 169 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 Q8N2B8 174 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 TOMM5Q8N4H5 51 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 GDPD1Q8N9F7 314 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 Q8N9W7 124 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 BVESQ8NE79 360 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 LINC01006Q8NI28 216 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 TCTEX1D2Q8WW35 142 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 DDB2Q92466 427 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 FLYWCH2Q96CP2 140 aaKnown RBP8.66□□□□□ -1.02
VPS13D-210ENST00000489961 TSNAXQ99598 290 aaKnown RBP8.66□□□□□ -1.02
VPS13D-210ENST00000489961 SRRQ9GZT4 340 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 FXYD6Q9H0Q3 95 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 ZNF702PQ9H963 129 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 PLSCR3Q9NRY6 295 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 LIN7CQ9NUP9 197 aaKnown RBP8.66□□□□□ -1.02
VPS13D-210ENST00000489961 RNF114Q9Y508 228 aa8.66□□□□□ -1.02
VPS13D-210ENST00000489961 GPR31O00270 319 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 TNFSF12O43508 249 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 PEX14O75381 377 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 IGKV1-16P04430 117 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 AMY1AP04745 511 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 PGAM2P15259 253 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 KIR2DS2P43631 304 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 INPP1P49441 399 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 F2RL1P55085 397 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 EIF4EBP1Q13541 118 aaPredicted RBP8.65□□□□□ -1.02
VPS13D-210ENST00000489961 SCGB2B2Q4G0G5 96 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 C9orf152Q5JTZ5 239 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 ZNF818PQ6ZRF7 136 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 LHFPL1Q86WI0 220 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 SLC38A6Q8IZM9 456 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 MFSD4AQ8N468 514 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 NPBQ8NG41 125 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 OR4D10Q8NGI6 311 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 OR4C16Q8NGL9 310 aa8.65□□□□□ -1.02
VPS13D-210ENST00000489961 TRIM63Q969Q1 353 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms