RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 MOGAT2Q3SYC2 334 aa12.09□□□□□ -0.47
PLOD3-216ENST00000489927 MS4A15Q8N5U1 240 aa12.09□□□□□ -0.47
PLOD3-216ENST00000489927 Q9N2K0 584 aa12.09□□□□□ -0.47
PLOD3-216ENST00000489927 PLCXD1Q9NUJ7 323 aa12.09□□□□□ -0.47
PLOD3-216ENST00000489927 ADAM30Q9UKF2 790 aa12.09□□□□□ -0.47
PLOD3-216ENST00000489927 IGKV1-6A0A0C4DH72 117 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 M0R1X1 148 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 IGLV2-23P01705 113 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 TRBV12-3P01733 135 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 HSD17B12Q53GQ0 312 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 CEACAM19Q7Z692 300 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 GTSCR1Q86UQ5 136 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 C8orf59Q8N0T1 100 aaPredicted RBP12.08□□□□□ -0.48
PLOD3-216ENST00000489927 FAM89BQ8N5H3 189 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 PACRGLQ8N7B6 248 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 BPIFB6Q8NFQ5 453 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 OR6M1Q8NGM8 313 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 TUBA4BQ9H853 241 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 C12orf4Q9NQ89 552 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 RDH8Q9NYR8 311 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 MGAT4AQ9UM21 535 aa12.08□□□□□ -0.48
PLOD3-216ENST00000489927 FOXI3A8MTJ6 420 aaPredicted RBP12.07□□□□□ -0.48
PLOD3-216ENST00000489927 IFNA6P05013 189 aa12.07□□□□□ -0.48
PLOD3-216ENST00000489927 CRYGBP07316 175 aa12.07□□□□□ -0.48
PLOD3-216ENST00000489927 CSN3P07498 182 aa12.07□□□□□ -0.48
PLOD3-216ENST00000489927 TMEM50BP56557 158 aa12.07□□□□□ -0.48
PLOD3-216ENST00000489927 P2RY14Q15391 338 aa12.07□□□□□ -0.48
PLOD3-216ENST00000489927 ZNF343Q6P1L6 599 aa12.07□□□□□ -0.48
PLOD3-216ENST00000489927 FBLIM1Q8WUP2 373 aa12.07□□□□□ -0.48
PLOD3-216ENST00000489927 URM1Q9BTM9 101 aaKnown RBP12.07□□□□□ -0.48
PLOD3-216ENST00000489927 TINAGL1Q9GZM7 467 aaPredicted RBP12.07□□□□□ -0.48
PLOD3-216ENST00000489927 SLC35D1Q9NTN3 355 aa12.07□□□□□ -0.48
PLOD3-216ENST00000489927 FKBP14Q9NWM8 211 aa12.07□□□□□ -0.48
PLOD3-216ENST00000489927 PEF1Q9UBV8 284 aaKnown RBP12.07□□□□□ -0.48
PLOD3-216ENST00000489927 HSF4Q9ULV5 492 aa12.07□□□□□ -0.48
PLOD3-216ENST00000489927 IZUMO1RA6ND01 250 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 RBMXL2O75526 392 aaKnown RBP12.06□□□□□ -0.48
PLOD3-216ENST00000489927 BRI3O95415 125 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 UCHL1P09936 223 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 AADACP22760 399 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 DYRK1AQ13627 763 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 LCN12Q6JVE5 192 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 Q8N402 240 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 ARHGAP5-AS1Q96IT6 56 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 TMEM68Q96MH6 324 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 MND1Q9BWT6 205 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 RETNQ9HD89 108 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 C8orf4Q9NR00 106 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 COA4Q9NYJ1 87 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 SIGLEC8Q9NYZ4 499 aa12.06□□□□□ -0.48
PLOD3-216ENST00000489927 APELAP0DMC3 54 aa12.05□□□□□ -0.48
PLOD3-216ENST00000489927 LGALS7P47929 136 aa12.05□□□□□ -0.48
PLOD3-216ENST00000489927 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.05□□□□□ -0.48
PLOD3-216ENST00000489927 BVESQ8NE79 360 aa12.05□□□□□ -0.48
PLOD3-216ENST00000489927 USMG5Q96IX5 58 aa12.05□□□□□ -0.48
PLOD3-216ENST00000489927 GFI1Q99684 422 aa12.05□□□□□ -0.48
PLOD3-216ENST00000489927 CMSS1Q9BQ75 279 aaKnown RBP12.05□□□□□ -0.48
PLOD3-216ENST00000489927 PECRQ9BY49 303 aa12.05□□□□□ -0.48
PLOD3-216ENST00000489927 PLGRKTQ9HBL7 147 aa12.05□□□□□ -0.48
PLOD3-216ENST00000489927 TRDCB7Z8K6 153 aa12.04□□□□□ -0.48
PLOD3-216ENST00000489927 CDK1P06493 297 aa12.04□□□□□ -0.48
PLOD3-216ENST00000489927 CD3GP09693 182 aa12.04□□□□□ -0.48
PLOD3-216ENST00000489927 TATDN3Q17R31 274 aa12.04□□□□□ -0.48
PLOD3-216ENST00000489927 MRGPRG-AS1Q2M3A8 158 aa12.04□□□□□ -0.48
PLOD3-216ENST00000489927 RPEL1Q2QD12 228 aa12.04□□□□□ -0.48
PLOD3-216ENST00000489927 RNLSQ5VYX0 342 aa12.04□□□□□ -0.48
PLOD3-216ENST00000489927 TMEM203Q969S6 136 aa12.04□□□□□ -0.48
PLOD3-216ENST00000489927 HARBI1Q96MB7 349 aa12.04□□□□□ -0.48
PLOD3-216ENST00000489927 OR2D2Q9H210 308 aa12.04□□□□□ -0.48
PLOD3-216ENST00000489927 SDHAF2Q9NX18 166 aa12.04□□□□□ -0.48
PLOD3-216ENST00000489927 LSM2Q9Y333 95 aaKnown RBP12.04□□□□□ -0.48
PLOD3-216ENST00000489927 SHISA3A0PJX4 238 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 MSGN1A6NI15 193 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 SRRM4A7MD48 611 aaKnown RBP12.03□□□□□ -0.48
PLOD3-216ENST00000489927 SLC17A2O00624 439 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 SHOXO15266 292 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 OR2A4O95047 310 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 SERPINB10P48595 397 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 MECP2P51608 486 aaKnown RBP12.03□□□□□ -0.48
PLOD3-216ENST00000489927 SPHARQ15513 63 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 TMEM177Q53S58 311 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 PLAC9Q5JTB6 97 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 LINC00322Q6ZN03 302 aaPredicted RBP12.03□□□□□ -0.48
PLOD3-216ENST00000489927 OR4A4PQ8NGN8 299 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 C5orf30Q96GV9 206 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 PHB2Q99623 299 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 FAM110AQ9BQ89 295 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 HIPK2Q9H2X6 1198 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 PLEKHA3Q9HB20 300 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 AK6Q9Y3D8 172 aaKnown RBP12.03□□□□□ -0.48
PLOD3-216ENST00000489927 CEPT1Q9Y6K0 416 aa12.03□□□□□ -0.48
PLOD3-216ENST00000489927 BET1O15155 118 aa12.02□□□□□ -0.49
PLOD3-216ENST00000489927 FABP7O15540 132 aa12.02□□□□□ -0.49
PLOD3-216ENST00000489927 JTBO76095 146 aa12.02□□□□□ -0.49
PLOD3-216ENST00000489927 CLDN12P56749 244 aa12.02□□□□□ -0.49
PLOD3-216ENST00000489927 MED22Q15528 200 aa12.02□□□□□ -0.49
PLOD3-216ENST00000489927 IGSF11Q5DX21 431 aa12.02□□□□□ -0.49
PLOD3-216ENST00000489927 LIPKQ5VXJ0 399 aa12.02□□□□□ -0.49
PLOD3-216ENST00000489927 ADAD2Q8NCV1 583 aaKnown RBP12.02□□□□□ -0.49
PLOD3-216ENST00000489927 SNAPC3Q92966 411 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms