RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 BRWD1-AS2P59051 145 aa11.52□□□□□ -0.57
VPS26A-205ENST00000489656 RAP2BP61225 183 aa11.52□□□□□ -0.57
VPS26A-205ENST00000489656 TAGLNQ01995 201 aaKnown RBP11.52□□□□□ -0.57
VPS26A-205ENST00000489656 PAX8Q06710 450 aa11.52□□□□□ -0.57
VPS26A-205ENST00000489656 ZNF585BQ52M93 769 aa11.52□□□□□ -0.57
VPS26A-205ENST00000489656 TMEM268Q5VZI3 342 aa11.52□□□□□ -0.57
VPS26A-205ENST00000489656 NCR3LG1Q68D85 454 aa11.52□□□□□ -0.57
VPS26A-205ENST00000489656 HCP5Q6MZN7 132 aa11.52□□□□□ -0.57
VPS26A-205ENST00000489656 VMO1Q7Z5L0 202 aa11.52□□□□□ -0.57
VPS26A-205ENST00000489656 TCTEX1D2Q8WW35 142 aa11.52□□□□□ -0.57
VPS26A-205ENST00000489656 RBPMSQ93062 196 aaKnown RBP11.52□□□□□ -0.57
VPS26A-205ENST00000489656 FYTTD1Q96QD9 318 aaKnown RBP11.52□□□□□ -0.57
VPS26A-205ENST00000489656 B4DSR2 109 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 ADAP1O75689 374 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 IFNA21P01568 189 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 MSMBP08118 114 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 ZNF16P17020 682 aaPredicted RBP11.51□□□□□ -0.57
VPS26A-205ENST00000489656 DCAF12L2Q5VW00 463 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 GGNBP1Q5YKI7 109 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 GSG1LQ6UXU4 331 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 ZNF695Q8IW36 515 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 PNKDQ8N490 385 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 OR4P4Q8NGL7 312 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 TBX15Q96SF7 602 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 SIRT7Q9NRC8 400 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 ZNRD1Q9P1U0 126 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 PRELID3BQ9Y3B1 194 aa11.51□□□□□ -0.57
VPS26A-205ENST00000489656 MAP1AP78559 2803 aaPredicted RBP11.5□□□□□ -0.57
VPS26A-205ENST00000489656 TRAV20A0A0B4J274 112 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 LY6LH3BQJ8 138 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 BUB1B-PAK6H3BSN5 160 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 CCSO14618 274 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 TXNL1O43396 289 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 TOX4O94842 621 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 SIX6O95475 246 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 IGKV1-39P01597 117 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 IGKV1D-39P04432 117 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 HOXB5P09067 269 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 CT45A6P0DMU7 189 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 CT45A5P0DMU8 189 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 CT45A7P0DMV0 189 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 HOXB4P17483 251 aaPredicted RBP11.5□□□□□ -0.57
VPS26A-205ENST00000489656 VDAC1P21796 283 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 GATA3P23771 443 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 COX7A1P24310 79 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 CYCSP99999 105 aaKnown RBP11.5□□□□□ -0.57
VPS26A-205ENST00000489656 NMSQ5H8A3 153 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 LYZL2Q7Z4W2 148 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 SPAG16Q8N0X2 631 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 SLC35G3Q8N808 338 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 ZNF383Q8NA42 475 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 LSM10Q969L4 123 aaKnown RBP11.5□□□□□ -0.57
VPS26A-205ENST00000489656 C2orf50Q96LR7 162 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 FOXC2Q99958 501 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 PCGF1Q9BSM1 259 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 REG4Q9BYZ8 158 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 NMES1Q9C002 83 aa11.5□□□□□ -0.57
VPS26A-205ENST00000489656 TET2Q6N021 2002 aaPredicted RBP11.5□□□□□ -0.57
VPS26A-205ENST00000489656 RNASEK-C17orf49H0YIS7 233 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 RAMP3O60896 148 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 ATG12O94817 140 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 C1QBP02746 253 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 RRASP10301 218 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 SLC25A6P12236 298 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 LPAR6P43657 344 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 DLX1P56177 255 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 LINC00205P59089 165 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 ZNF816Q0VGE8 651 aaPredicted RBP11.49□□□□□ -0.57
VPS26A-205ENST00000489656 DHRS7BQ6IAN0 325 aaPredicted RBP11.49□□□□□ -0.57
VPS26A-205ENST00000489656 LINC01356Q8N9X3 169 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 OR10C1Q96KK4 312 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 Q96MF0 132 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 NABP2Q9BQ15 211 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 PLEKHA2Q9HB19 425 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 COMMD9Q9P000 198 aa11.49□□□□□ -0.57
VPS26A-205ENST00000489656 C5orf51A6NDU8 294 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 FAM25EA8MYX2 175 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 G3V3Q6 166 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 HPRT1P00492 218 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 ARG1P05089 322 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 HNRNPCP07910 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
VPS26A-205ENST00000489656 UBE2E1P51965 193 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 KLRD1Q13241 179 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 IL15RAQ13261 267 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 MINOS1Q5TGZ0 78 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 TGIF2LXQ8IUE1 241 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 FAM219AQ8IW50 185 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 DRAXINQ8NBI3 349 aaPredicted RBP11.48□□□□□ -0.57
VPS26A-205ENST00000489656 OR5AN1Q8NGI8 311 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 OR2T35Q8NGX2 323 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 OR4S2Q8NH73 311 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 SEC22AQ96IW7 307 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 SPIN2AQ99865 258 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 SPIN2BQ9BPZ2 258 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 PDCD10Q9BUL8 212 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 MRPL20Q9BYC9 149 aaKnown RBP11.48□□□□□ -0.57
VPS26A-205ENST00000489656 CHIAQ9BZP6 476 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 LPAR2Q9HBW0 351 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 MINOS1-NBL1R4GNA1 71 aa11.48□□□□□ -0.57
VPS26A-205ENST00000489656 HECTD1Q9ULT8 2610 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms