RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 ZNF337Q9Y3M9 751 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 HEY1Q9Y5J3 304 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 WDR90Q96KV7 1748 aa0.91□□□□□ -2.26
CPSF3-205ENST00000489629 DICER1Q9UPY3 1922 aaKnown RBP0.91□□□□□ -2.26
CPSF3-205ENST00000489629 RALGAPA2Q2PPJ7 1873 aa0.9□□□□□ -2.26
CPSF3-205ENST00000489629 ADGRB3O60242 1522 aa0.9□□□□□ -2.26
CPSF3-205ENST00000489629 CACNA1GO43497 2377 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 COL4A2P08572 1712 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 GREB1Q4ZG55 1949 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 TGIF2-C20orf24A0A0A6YYL0 155 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 TEX50A0A1B0GTY4 177 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 ODF3BA8MYP8 253 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 COPEO14579 308 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 TGOLN2O43493 480 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 STX10O60499 249 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 CRYBA1P05813 215 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 OR4A8P0C604 315 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 SLC25A16P16260 332 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 CSRP1P21291 193 aaKnown RBP0.9□□□□□ -2.27
CPSF3-205ENST00000489629 CA7P43166 264 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 SNAP25P60880 206 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 HLA-DRB3P79483 266 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 FABP5Q01469 135 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 ITGB3BPQ13352 177 aaPredicted RBP0.9□□□□□ -2.27
CPSF3-205ENST00000489629 LGALS9BQ3B8N2 356 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 ACSBG2Q5FVE4 666 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 COQ5Q5HYK3 327 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 C1orf195Q5TG92 126 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 LGALS9CQ6DKI2 356 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 SFXN4Q6P4A7 337 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 RASL11AQ6T310 242 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 SPATA12Q7Z6I5 190 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 GPHB5Q86YW7 130 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 LRRC34Q8IZ02 419 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 Q8N402 240 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 NATD1Q8N6N6 113 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 DAND5Q8N907 189 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 DNAAF3Q8N9W5 541 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 Q8NDZ9 215 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 GPR32P1Q8NGA4 272 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 OR2T4Q8NH00 348 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 GPR119Q8TDV5 335 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 RAB8BQ92930 207 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 TMBIM1Q969X1 311 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 PTH2Q96A98 100 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 DHRS9Q9BPW9 319 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 SMDT1Q9H4I9 107 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 LRRC19Q9H756 370 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 TUBA4BQ9H853 241 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 SLC2A9Q9NRM0 540 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 SPANXB1Q9NS25 103 aaPredicted RBP0.9□□□□□ -2.27
CPSF3-205ENST00000489629 DKKL1Q9UK85 242 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 CCL26Q9Y258 94 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 COQ4Q9Y3A0 265 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 PCYT1BQ9Y5K3 369 aaPredicted RBP0.9□□□□□ -2.27
CPSF3-205ENST00000489629 KIF15Q9NS87 1388 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 MAST2Q6P0Q8 1798 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 ICE1Q9Y2F5 2266 aa0.9□□□□□ -2.27
CPSF3-205ENST00000489629 PTPRJQ12913 1337 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 MALRD1Q5VYJ5 2156 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 CPAMD8Q8IZJ3 1885 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 TRAV8-1A0A0A6YYK1 113 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 IGHV3-73A0A0B4J1V6 119 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 GSTZ1O43708 216 aaPredicted RBP0.89□□□□□ -2.27
CPSF3-205ENST00000489629 SSNA1O43805 119 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 IL3P08700 152 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 CD7P09564 240 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 CRHBPP24387 322 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 BLVRBP30043 206 aaPredicted RBP0.89□□□□□ -2.27
CPSF3-205ENST00000489629 MAP2K4P45985 399 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 GABRA4P48169 554 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 AKR1C2P52895 323 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 TCL1AP56279 114 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 TMEM33P57088 247 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 UBE2IP63279 158 aaKnown RBP0.89□□□□□ -2.27
CPSF3-205ENST00000489629 ZNF117Q03924 483 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 RSU1Q15404 277 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 LRRC75BQ2VPJ9 315 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 HSP90B2PQ58FF3 399 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 CLVS2Q5SYC1 327 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 OR10K2Q6IF99 312 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 SBSNQ6UWP8 590 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 LRRN1Q6UXK5 716 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 C2orf91Q6ZV80 131 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 BAP18Q8IXM2 172 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 OR8J2Q8NGG1 315 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 OR4K13Q8NH42 304 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 PIGXQ8TBF5 258 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 RPS4Y2Q8TD47 263 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 TESCQ96BS2 214 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 SFRP2Q96HF1 295 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 CAPZA3Q96KX2 299 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 EIF5A2Q9GZV4 153 aaKnown RBP0.89□□□□□ -2.27
CPSF3-205ENST00000489629 OR51I1Q9H343 314 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 EMC3Q9P0I2 261 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 HHLA2Q9UM44 414 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 FIS1Q9Y3D6 152 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 POLR3HQ9Y535 204 aaPredicted RBP0.89□□□□□ -2.27
CPSF3-205ENST00000489629 NUMA1Q14980 2115 aa0.89□□□□□ -2.27
CPSF3-205ENST00000489629 EVC2Q86UK5 1308 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms