RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 RPP30P78346 268 aaKnown RBP6.28□□□□□ -1.4
SSR1-210ENST00000489567 PRR20EP86478 221 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 PRR20CP86479 221 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 PRR20DP86480 221 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 PRR20BP86481 221 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 PRR20AP86496 221 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 PITPNAQ00169 270 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 FOXL1Q12952 345 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 HNF4GQ14541 408 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 KIR2DS1Q14954 304 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 RPL39P5Q59GN2 51 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 TMEM69Q5SWH9 247 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 LINC01006Q8NI28 216 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 CAPSLQ8WWF8 208 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 ACOT12Q8WYK0 555 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 MRPL20Q9BYC9 149 aaKnown RBP6.28□□□□□ -1.4
SSR1-210ENST00000489567 TOLLIPQ9H0E2 274 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 MIXL1Q9H2W2 232 aa6.28□□□□□ -1.4
SSR1-210ENST00000489567 RAB19A4D1S5 217 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 SH2D7A6NKC9 451 aaPredicted RBP6.27□□□□□ -1.41
SSR1-210ENST00000489567 F8W036 122 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 CTDSP2O14595 271 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 ITGB1BP1O14713 200 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 LANCL1O43813 399 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 IGKV1D-33P01593 117 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 IGKV1-33P01594 117 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 IL3RAP26951 378 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 LINC00205P59089 165 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 IFITM2Q01629 132 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 SRSF4Q08170 494 aaKnown RBP6.27□□□□□ -1.41
SSR1-210ENST00000489567 PXDC1Q5TGL8 231 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 WDR73Q6P4I2 378 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 C12orf54Q6X4T0 127 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 ZNF833PQ6ZTB9 187 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 TGIF2LXQ8IUE1 241 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 LAX1Q8IWV1 398 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 OR10J5Q8NHC4 309 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 SNAPC3Q92966 411 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 C5orf30Q96GV9 206 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 NABP2Q9BQ15 211 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 SLC25A33Q9BSK2 321 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 SLIRPQ9GZT3 109 aaKnown RBP6.27□□□□□ -1.41
SSR1-210ENST00000489567 ZNF702PQ9H963 129 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 PITPNC1Q9UKF7 332 aa6.27□□□□□ -1.41
SSR1-210ENST00000489567 MRPS7Q9Y2R9 242 aaKnown RBP6.27□□□□□ -1.41
SSR1-210ENST00000489567 RBMX2Q9Y388 322 aaKnown RBP6.27□□□□□ -1.41
SSR1-210ENST00000489567 FAM25AB3EWG3 89 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 FAM25CB3EWG5 89 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 FAM25GB3EWG6 89 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 OR2F2O95006 317 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 DHFRP00374 187 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 OR8U9P0C7N5 309 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 NFYAP23511 347 aaPredicted RBP6.26□□□□□ -1.41
SSR1-210ENST00000489567 KRTAP10-3P60369 221 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 EBI3Q14213 229 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 HES1Q14469 280 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 GLDNQ6ZMI3 551 aaPredicted RBP6.26□□□□□ -1.41
SSR1-210ENST00000489567 HOGA1Q86XE5 327 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 H1FOOQ8IZA3 346 aaPredicted RBP6.26□□□□□ -1.41
SSR1-210ENST00000489567 BEST4Q8NFU0 473 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 OR8U1Q8NH10 309 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 OR4F5Q8NH21 305 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 AP3S1Q92572 193 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 RITA1Q96K30 269 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 C16orf95Q9H693 158 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 SLA2Q9H6Q3 261 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 CCDC59Q9P031 241 aaKnown RBP6.26□□□□□ -1.41
SSR1-210ENST00000489567 ANXA10Q9UJ72 324 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 TENM1Q9UKZ4 2725 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 CLPSL1A2RUU4 121 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 CCDC160A6NGH7 325 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 HMX3A6NHT5 357 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 J3QRK9 145 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 RAB29O14966 203 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 NOL3O60936 208 aaKnown RBP6.26□□□□□ -1.41
SSR1-210ENST00000489567 DIRAS3O95661 229 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 FAM106CPP0CH98 169 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 CT45A6P0DMU7 189 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 CT45A5P0DMU8 189 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 CT45A7P0DMV0 189 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 CD1BP29016 333 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 PROK1P58294 105 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 SPCS3P61009 180 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 HIST2H2BDQ6DRA6 164 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 CNIH2Q6PI25 160 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 SNX29P2Q8IUI4 249 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 Q8N6K4 173 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 EDARADDQ8WWZ3 215 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 GINS4Q9BRT9 223 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 NPFFR1Q9GZQ6 430 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 BEX1Q9HBH7 125 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 RAB18Q9NP72 206 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 PIPOXQ9P0Z9 390 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 ANAPC10Q9UM13 185 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 PRELID3BQ9Y3B1 194 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 MMP24Q9Y5R2 645 aa6.26□□□□□ -1.41
SSR1-210ENST00000489567 IGKV1D-13A0A0B4J2D9 117 aa6.25□□□□□ -1.41
SSR1-210ENST00000489567 RGS5O15539 181 aa6.25□□□□□ -1.41
SSR1-210ENST00000489567 CCNKO75909 580 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms