RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 IGSF23A1L1A6 192 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 RNASEK-C17orf49H0YIS7 233 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 C15orf65H3BRN8 121 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 K7N7A8 449 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 F2RL2O00254 374 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 ABCD4O14678 606 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 CHST1O43916 411 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 CLDN14O95500 239 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 IFNA5P01569 189 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 HBE1P02100 147 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 P0C879 139 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 MUC1P15941 1255 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-207ENST00000489357 TNFRSF1AP19438 455 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 CD40P25942 277 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 CAMLGP49069 296 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 RAB7AP51149 207 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 ZNF83P51522 516 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 SERF2P84101 59 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 TLE4Q04727 773 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 AESQ08117 197 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 ZNF273Q14593 569 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 ATP6V1FQ16864 119 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 AARDQ4LEZ3 155 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 ZNF585BQ52M93 769 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 PRAMEF6Q5VXH4 476 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 ZNF826PQ6ZT77 177 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 OR10A7Q8NGE5 316 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 OR5C1Q8NGR4 320 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 SDSLQ96GA7 329 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 OR2V2Q96R30 315 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 OR2D2Q9H210 308 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 HRH4Q9H3N8 390 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 LINC00574Q9H8X3 128 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-207ENST00000489357 C19orf12Q9NSK7 152 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 RNF7Q9UBF6 113 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 HSPB7Q9UBY9 170 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 CELSR2Q9HCU4 2923 aa7.04□□□□□ -1.28
VTI1A-207ENST00000489357 IGKV1D-17A0A075B6S4 117 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 FAM24AA6NFZ4 105 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 F8W036 122 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 WNT9BO14905 357 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 RAB29O14966 203 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 TNFSF12O43508 249 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 NDUFS6O75380 124 aaKnown RBP7.03□□□□□ -1.28
VTI1A-207ENST00000489357 IGKV1-39P01597 117 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 IGKV1-5P01602 117 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 PRH1P02810 166 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 IGKV1D-39P04432 117 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 PAX6P26367 422 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 SNCAP37840 140 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 PAX9P55771 341 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 DEFA5Q01523 94 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 Q3ZCU0 254 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 PDLIM3Q53GG5 364 aaPredicted RBP7.03□□□□□ -1.28
VTI1A-207ENST00000489357 PUSL1Q8N0Z8 303 aaKnown RBP7.03□□□□□ -1.28
VTI1A-207ENST00000489357 FGFRL1Q8N441 504 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 PRR18Q8N4B5 295 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 CD177Q8N6Q3 437 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 OR1L1Q8NH94 360 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 PINX1Q96BK5 328 aaKnown RBP7.03□□□□□ -1.28
VTI1A-207ENST00000489357 ANAPC16Q96DE5 110 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 RBMXL1Q96E39 390 aaKnown RBP7.03□□□□□ -1.28
VTI1A-207ENST00000489357 C14orf79Q96F83 325 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 MISP3Q96FF7 219 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 AGMATQ9BSE5 352 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 MRPL37Q9BZE1 423 aaKnown RBP7.03□□□□□ -1.28
VTI1A-207ENST00000489357 SMIM3Q9BZL3 60 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 WFDC1Q9HC57 220 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 TREM1Q9NP99 234 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 UFSP2Q9NUQ7 469 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 COQ3Q9NZJ6 369 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 CACNG5Q9UF02 275 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 DUSP13Q9UII6 198 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 PPP1R3CQ9UQK1 317 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 TIMM9Q9Y5J7 89 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 SPG11Q96JI7 2443 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 CADP27708 2225 aa7.03□□□□□ -1.28
VTI1A-207ENST00000489357 CHD3Q12873 2000 aaKnown RBP7.02□□□□□ -1.29
VTI1A-207ENST00000489357 LRRC30A6NM36 301 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 C19orf84I3L1E1 186 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 PPIHO43447 177 aaKnown RBP7.02□□□□□ -1.29
VTI1A-207ENST00000489357 TMEM50AO95807 157 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 CGB3P0DN86 165 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 CGB7P0DN87 165 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 IRF2P14316 349 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 ATP6V0CP27449 155 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 GLIPR1P48060 266 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 RPP30P78346 268 aaKnown RBP7.02□□□□□ -1.29
VTI1A-207ENST00000489357 TNFAIP6P98066 277 aaPredicted RBP7.02□□□□□ -1.29
VTI1A-207ENST00000489357 TNFRSF9Q07011 255 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 BTN1A1Q13410 526 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 PMS2P11Q13670 270 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 AKR1C8PQ5T2L2 129 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 TEX36Q5VZQ5 186 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 STUMQ69YW2 141 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 DHRS7BQ6IAN0 325 aaPredicted RBP7.02□□□□□ -1.29
VTI1A-207ENST00000489357 CENPVQ7Z7K6 275 aaPredicted RBP7.02□□□□□ -1.29
VTI1A-207ENST00000489357 C1orf87Q8N0U7 546 aa7.02□□□□□ -1.29
VTI1A-207ENST00000489357 OR13A1Q8NGR1 328 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms