RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 GPN1Q9HCN4 374 aaPredicted RBP12.96□□□□□ -0.33
CLDN11-208ENST00000488989 LIN7CQ9NUP9 197 aaKnown RBP12.96□□□□□ -0.33
CLDN11-208ENST00000488989 ALG5Q9Y673 324 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 ANK3Q12955 4377 aaKnown RBP12.95□□□□□ -0.34
CLDN11-208ENST00000488989 A0A0A6YYJ9 748 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 A0A0B4J2A0 478 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 DUS4LO95620 317 aaKnown RBP12.95□□□□□ -0.34
CLDN11-208ENST00000488989 HLA-AP01891 365 aaKnown RBP12.95□□□□□ -0.34
CLDN11-208ENST00000488989 OR5AC1P0C628 307 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 IGHV4-38-2P0DP08 117 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 SAA4P35542 130 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 LGALS4P56470 323 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 BRWD1-AS2P59051 145 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 TAGLNQ01995 201 aaKnown RBP12.95□□□□□ -0.34
CLDN11-208ENST00000488989 OR8H3Q8N146 312 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 PIP4P2Q8N4L2 257 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 ZNF383Q8NA42 475 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 OR5AN1Q8NGI8 311 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 OR52B4Q8NGK2 314 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 OR51H1Q8NH63 302 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 GLYATL2Q8WU03 294 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 MITD1Q8WV92 249 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 RPEQ96AT9 228 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 MALSU1Q96EH3 234 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 TP53RKQ96S44 253 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 TMUB1Q9BVT8 246 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 MRPL20Q9BYC9 149 aaKnown RBP12.95□□□□□ -0.34
CLDN11-208ENST00000488989 SHPKQ9UHJ6 478 aa12.95□□□□□ -0.34
CLDN11-208ENST00000488989 A0A1W2PPI3 338 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 A0A1W2PRD5 423 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 A0A1W2PRF3 423 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 A0A1W2PRM7 423 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 RBFOX2O43251 390 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLDN11-208ENST00000488989 CREBL2O60519 120 aaPredicted RBP12.94□□□□□ -0.34
CLDN11-208ENST00000488989 IFNA2P01563 188 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 ANXA3P12429 323 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 EPHA1P21709 976 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 VAMP1P23763 118 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 KIR2DS2P43631 304 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 LINC00205P59089 165 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 HABP2Q14520 560 aaPredicted RBP12.94□□□□□ -0.34
CLDN11-208ENST00000488989 ZNF585BQ52M93 769 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 LRTM2Q8N967 370 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 TCTEX1D2Q8WW35 142 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 TMEM222Q9H0R3 208 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 PRELID3BQ9Y3B1 194 aa12.94□□□□□ -0.34
CLDN11-208ENST00000488989 TLN2Q9Y4G6 2542 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 IGHV1-3A0A0C4DH29 117 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 H0YJW9 148 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 CDS2O95674 445 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 FOSL1P15407 271 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 REG1BP48304 166 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 SLC9A3R2Q15599 337 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 ANKRD55Q3KP44 614 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 SP6Q3SY56 376 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 RUSC1-AS1Q66K80 236 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 CCDC144NLQ6NUI1 221 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 LIAT1Q6ZQX7 453 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 TEX29Q8N6K0 151 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 DRAXINQ8NBI3 349 aaPredicted RBP12.93□□□□□ -0.34
CLDN11-208ENST00000488989 NANPQ8TBE9 248 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 CD300LFQ8TDQ1 290 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 TMEM56Q96MV1 263 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 OR51J1Q9H342 316 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 TMEM56-RWDD3S4R434 201 aa12.93□□□□□ -0.34
CLDN11-208ENST00000488989 A0A1B0GVG6 124 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 CYSRT1A8MQ03 144 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 RRASP10301 218 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 RPA2P15927 270 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 SRPXP78539 464 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 C9orf139Q6ZV77 190 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 SPAG16Q8N0X2 631 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 DYNAPQ8N1N2 210 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 C12orf45Q8N5I9 185 aaPredicted RBP12.92□□□□□ -0.34
CLDN11-208ENST00000488989 CASTOR1Q8WTX7 329 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 C17orf50Q8WW18 174 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 CFHR4Q92496 578 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 IL22RA2Q969J5 263 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 MEGF9Q9H1U4 602 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 TMEM160Q9NX00 188 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 NUP50Q9UKX7 468 aa12.92□□□□□ -0.34
CLDN11-208ENST00000488989 CELSR1Q9NYQ6 3014 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 IGHV3OR16-10A0A075B7F0 116 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 DBX1A6NMT0 343 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 APOA2P02652 100 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 MC5RP33032 325 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 CBX3Q13185 183 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 SSX2Q16385 188 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 DHRS7BQ6IAN0 325 aaPredicted RBP12.91□□□□□ -0.34
CLDN11-208ENST00000488989 PDPNQ86YL7 162 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 LGI3Q8N145 548 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 COQ8AQ8NI60 647 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 LHFPL5Q8TAF8 219 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 PHB2Q99623 299 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 SLC35D1Q9NTN3 355 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 HILPDAQ9Y5L2 63 aa12.91□□□□□ -0.34
CLDN11-208ENST00000488989 PIGBOS1A0A0B4J2F0 54 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 DUXBA0A1W2PPF3 345 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 FAM90A9PA6NNJ1 464 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 RAMP3O60896 148 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms