RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 ACOT6Q3I5F7 207 aaPredicted RBP16.46■□□□□ 0.23
HMG20B-213ENST00000488973 PEAR1Q5VY43 1037 aaPredicted RBP16.46■□□□□ 0.23
HMG20B-213ENST00000488973 FSCN3Q9NQT6 498 aa16.46■□□□□ 0.23
HMG20B-213ENST00000488973 LAMTOR5O43504 91 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 CLDN1O95832 211 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 BTNL3Q6UXE8 466 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 ZNF497Q6ZNH5 498 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 HSPB7Q9UBY9 170 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 PINLYPA6NC86 204 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 WDR1O75083 606 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 VENTXO95231 258 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 SELEP16581 610 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 CEACAM8P31997 349 aaPredicted RBP16.45■□□□□ 0.22
HMG20B-213ENST00000488973 COL5A1-AS1Q5SY13 56 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 CISD2Q8N5K1 135 aaKnown RBP16.45■□□□□ 0.22
HMG20B-213ENST00000488973 DRAM1Q8N682 238 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 OR10G9Q8NGN4 311 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 OR10G7Q8NGN6 311 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 OR2T10Q8NGZ9 312 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 OR4F5Q8NH21 305 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 TMEM18Q96B42 140 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 OR4F4Q96R69 305 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 TMEM147Q9BVK8 224 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 ELOVL1Q9BW60 279 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 SLC25A22Q9H936 323 aa16.45■□□□□ 0.22
HMG20B-213ENST00000488973 LILRA1O75019 489 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 BMI1P35226 326 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 FOXG1P55316 489 aaPredicted RBP16.44■□□□□ 0.22
HMG20B-213ENST00000488973 NUFIP2Q7Z417 695 aaKnown RBP16.44■□□□□ 0.22
HMG20B-213ENST00000488973 PPP1R32Q7Z5V6 425 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 ARHGAP21Q5T5U3 1957 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 TMEM238C9JI98 176 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 RHBDL1O75783 438 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 GYPAP02724 150 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 ZNF705AQ6ZN79 300 aaPredicted RBP16.44■□□□□ 0.22
HMG20B-213ENST00000488973 TUSC5Q8IXB3 177 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 C11orf42Q8N5U0 333 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 CORO2AQ92828 525 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 OR6C3Q9NZP0 311 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 TRAPPC2LQ9UL33 140 aa16.44■□□□□ 0.22
HMG20B-213ENST00000488973 TRAV39A0A0B4J263 110 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 J3QT63 122 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 HMGB3O15347 200 aaKnown RBP16.43■□□□□ 0.22
HMG20B-213ENST00000488973 CCKARP32238 428 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 CYB561P49447 251 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 PLP2Q04941 152 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 RTP5Q14D33 572 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 MED12LQ86YW9 2145 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 DOCK10Q96BY6 2186 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 DIDO1Q9BTC0 2240 aaKnown RBP16.43■□□□□ 0.22
HMG20B-213ENST00000488973 MSMO1Q15800 293 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 TMEM37Q8WXS4 190 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 RPH3ALQ9UNE2 315 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 FUT9Q9Y231 359 aa16.43■□□□□ 0.22
HMG20B-213ENST00000488973 KMT2EQ8IZD2 1858 aa16.42■□□□□ 0.22
HMG20B-213ENST00000488973 A6NJY4 79 aa16.42■□□□□ 0.22
HMG20B-213ENST00000488973 C3orf80F5H4A9 247 aa16.42■□□□□ 0.22
HMG20B-213ENST00000488973 NTN3O00634 580 aaPredicted RBP16.42■□□□□ 0.22
HMG20B-213ENST00000488973 COX5AP20674 150 aa16.42■□□□□ 0.22
HMG20B-213ENST00000488973 NEIL1Q96FI4 390 aaPredicted RBP16.42■□□□□ 0.22
HMG20B-213ENST00000488973 MBNL3Q9NUK0 354 aaKnown RBP16.42■□□□□ 0.22
HMG20B-213ENST00000488973 BOKQ9UMX3 212 aaPredicted RBP16.42■□□□□ 0.22
HMG20B-213ENST00000488973 A0A1W2PR80 420 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 OTX2P32243 289 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 FFAR4Q5NUL3 377 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 KCNIP4Q6PIL6 250 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 C1orf210Q8IVY1 113 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 GATAD1Q8WUU5 269 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 OR2J1Q9GZK6 312 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 WIPI2Q9Y4P8 454 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 PMS2P5A8MQ11 134 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 SYNGR4O95473 234 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 P0C879 139 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 SPINK2P20155 84 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 LHX2P50458 406 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 LCN2P80188 198 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 SRYQ05066 204 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 ZBTB34Q8NCN2 500 aa16.41■□□□□ 0.22
HMG20B-213ENST00000488973 SIRPB1O00241 398 aa16.4■□□□□ 0.22
HMG20B-213ENST00000488973 OR2H2O95918 312 aa16.4■□□□□ 0.22
HMG20B-213ENST00000488973 PTTG1IPP53801 180 aa16.4■□□□□ 0.22
HMG20B-213ENST00000488973 Q8IYB0 196 aa16.4■□□□□ 0.22
HMG20B-213ENST00000488973 LRRC30A6NM36 301 aa16.4■□□□□ 0.22
HMG20B-213ENST00000488973 CA6P23280 308 aa16.4■□□□□ 0.22
HMG20B-213ENST00000488973 WNT5AP41221 380 aa16.4■□□□□ 0.22
HMG20B-213ENST00000488973 RAB7AP51149 207 aa16.4■□□□□ 0.22
HMG20B-213ENST00000488973 TLE1Q04724 770 aa16.4■□□□□ 0.22
HMG20B-213ENST00000488973 CLEC12BQ2HXU8 276 aa16.4■□□□□ 0.22
HMG20B-213ENST00000488973 OR10P1Q8NGE3 313 aa16.4■□□□□ 0.22
HMG20B-213ENST00000488973 POLR3KQ9Y2Y1 108 aaPredicted RBP16.4■□□□□ 0.22
HMG20B-213ENST00000488973 PAGE4O60829 102 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 CLDN18P56856 261 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 ZNF645Q8N7E2 425 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 ORAOV1Q8WV07 137 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 APH1AQ96BI3 265 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 BTF3L4Q96K17 158 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.39■□□□□ 0.21
HMG20B-213ENST00000488973 FOXJ2Q9P0K8 574 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 DOCK11Q5JSL3 2073 aa16.39■□□□□ 0.21
HMG20B-213ENST00000488973 CD99P14209 185 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms