RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 FOXE3Q13461 319 aa11.9□□□□□ -0.5
CYTH3-209ENST00000488964 ZNF660Q6AZW8 331 aaPredicted RBP11.9□□□□□ -0.5
CYTH3-209ENST00000488964 TMEM65Q6PI78 240 aa11.9□□□□□ -0.5
CYTH3-209ENST00000488964 BORCS5Q969J3 196 aa11.9□□□□□ -0.5
CYTH3-209ENST00000488964 OR51J1Q9H342 316 aa11.9□□□□□ -0.5
CYTH3-209ENST00000488964 PARP11Q9NR21 331 aa11.9□□□□□ -0.5
CYTH3-209ENST00000488964 LINC00527Q9UJ94 153 aa11.9□□□□□ -0.5
CYTH3-209ENST00000488964 FAM25AB3EWG3 89 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 FAM25CB3EWG5 89 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 FAM25GB3EWG6 89 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 SHOXO15266 292 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 CREBL2O60519 120 aaPredicted RBP11.89□□□□□ -0.51
CYTH3-209ENST00000488964 ZNF182P17025 639 aaPredicted RBP11.89□□□□□ -0.51
CYTH3-209ENST00000488964 NFYAP23511 347 aaPredicted RBP11.89□□□□□ -0.51
CYTH3-209ENST00000488964 CD40LGP29965 261 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 PRSS3P35030 304 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 TAS2R46P59540 309 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 RPL23AP62750 156 aaKnown RBP11.89□□□□□ -0.51
CYTH3-209ENST00000488964 TMEM267Q0VDI3 215 aaPredicted RBP11.89□□□□□ -0.51
CYTH3-209ENST00000488964 TCTEX1D1Q8N7M0 179 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 ZNF383Q8NA42 475 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 RAB2BQ8WUD1 216 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 HARBI1Q96MB7 349 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 BCL7BQ9BQE9 202 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 HSPB9Q9BQS6 159 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 FBXL15Q9H469 300 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 METTL1Q9UBP6 276 aaKnown RBP11.89□□□□□ -0.51
CYTH3-209ENST00000488964 ADAM30Q9UKF2 790 aa11.89□□□□□ -0.51
CYTH3-209ENST00000488964 IGKV1D-8A0A087WSZ0 117 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 J3QRK9 145 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 HLA-DQB1P01920 261 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 CD33P20138 364 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 CNTFRP26992 372 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 ALDH3B2P48448 385 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 HERV-K104P61576 105 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 CDK10Q15131 360 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 VMA21Q3ZAQ7 101 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 KCTD9Q7L273 389 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 OR5AP2Q8NGF4 316 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 C15orf40Q8WUR7 153 aa11.88□□□□□ -0.51
CYTH3-209ENST00000488964 HSD17B10Q99714 261 aaKnown RBP11.88□□□□□ -0.51
CYTH3-209ENST00000488964 NOTCH3Q9UM47 2321 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 IGHV7-81A0A0B4J1V7 117 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 TRAV41A0A0B4J266 112 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 ATP6V0E1O15342 81 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 TUSC2O75896 110 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 IGKV1-16P04430 117 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 FCGR2CP31995 323 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 RPL5P46777 297 aaKnown RBP11.87□□□□□ -0.51
CYTH3-209ENST00000488964 PSG5Q15238 335 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 MSMO1Q15800 293 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 CTF1Q16619 201 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 CLVS1Q8IUQ0 354 aaPredicted RBP11.87□□□□□ -0.51
CYTH3-209ENST00000488964 GVQW1Q8N7I0 195 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 BVESQ8NE79 360 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 KLHL30-AS1Q8NEE0 82 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 OR5H2Q8NGV7 314 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 DCUN1D5Q9BTE7 237 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 GPR61Q9BZJ8 451 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 SCPEP1Q9HB40 452 aa11.87□□□□□ -0.51
CYTH3-209ENST00000488964 SLC25A17O43808 307 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 CNIH1O95406 144 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 IGHG4P01861 327 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 EIF4EP06730 217 aaKnown RBP11.86□□□□□ -0.51
CYTH3-209ENST00000488964 DUTP33316 252 aaKnown RBP11.86□□□□□ -0.51
CYTH3-209ENST00000488964 KIR2DS2P43631 304 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 CATR1Q13166 79 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 ECSCRQ19T08 205 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 HIST2H2BDQ6DRA6 164 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 PYHIN1Q6K0P9 492 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 C10orf99Q6UWK7 81 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 ZNF562Q6V9R5 426 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 ZNF695Q8IW36 515 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 ZBTB34Q8NCN2 500 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 OSR1Q8TAX0 266 aaPredicted RBP11.86□□□□□ -0.51
CYTH3-209ENST00000488964 SECTM1Q8WVN6 248 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 RITA1Q96K30 269 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 NAA50Q9GZZ1 169 aaKnown RBP11.86□□□□□ -0.51
CYTH3-209ENST00000488964 EHFQ9NZC4 300 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
CYTH3-209ENST00000488964 RBMX2Q9Y388 322 aaKnown RBP11.86□□□□□ -0.51
CYTH3-209ENST00000488964 MEIS3P1A6NDR6 274 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 LINC01548A6NM66 108 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 ADARB2-AS1A8MUL3 147 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 SULT1C2O00338 296 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 PLXNB1O43157 2135 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 HPGDSO60760 199 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 PROP1O75360 226 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 ACTL6BO94805 426 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 DUS4LO95620 317 aaKnown RBP11.85□□□□□ -0.51
CYTH3-209ENST00000488964 CRYZL1O95825 349 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 PPYP01298 95 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 S100GP29377 79 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 TMBIM6P55061 237 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 CX3CL1P78423 397 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 TMEM177Q53S58 311 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 ZNF66Q6ZN08 573 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 PPP1R27Q86WC6 154 aa11.85□□□□□ -0.51
CYTH3-209ENST00000488964 OR4S2Q8NH73 311 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms