RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 KHDC3LQ587J8 217 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 WDR82Q6UXN9 313 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 DPPA3Q6W0C5 159 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 Q6ZT83 130 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 ZNF610Q8N9Z0 462 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 GALMQ96C23 342 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 MAP1LC3BQ9GZQ8 125 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 WDR61Q9GZS3 305 aaKnown RBP10.59□□□□□ -0.71
CLIC4-202ENST00000488683 DOK5Q9P104 306 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 TRAV1-1A0A0B4J248 108 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 HBE1P02100 147 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 TUBG1P23258 451 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 EIF4EBP1Q13541 118 aaPredicted RBP10.59□□□□□ -0.71
CLIC4-202ENST00000488683 GUSBP1Q15486 140 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 CD177Q8N6Q3 437 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 WDR31Q8NA23 367 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 ZNRF1Q8ND25 227 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 OR2Z1Q8NG97 314 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 METTL1Q9UBP6 276 aaKnown RBP10.59□□□□□ -0.71
CLIC4-202ENST00000488683 ZZEF1O43149 2961 aa10.59□□□□□ -0.71
CLIC4-202ENST00000488683 BCL2P10415 239 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 ADIRFQ15847 76 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 PRSS8Q16651 343 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 ZNF645Q8N7E2 425 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 SNIP1Q8TAD8 396 aaKnown RBP10.58□□□□□ -0.72
CLIC4-202ENST00000488683 CA5BP1Q8WTZ4 195 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 TAF15Q92804 592 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLIC4-202ENST00000488683 LHX4Q969G2 390 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 UNKLQ9H9P5 680 aaKnown RBP10.58□□□□□ -0.72
CLIC4-202ENST00000488683 KCNIP1Q9NZI2 227 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 TNCP24821 2201 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 TMEM30CPA0ZSE6 113 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 DSCAMO60469 2012 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 IGKV3-15P01624 115 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 S100A9P06702 114 aaKnown RBP10.58□□□□□ -0.72
CLIC4-202ENST00000488683 MYOD1P15172 320 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 RPL39P5Q59GN2 51 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 INO80CQ6PI98 192 aaPredicted RBP10.58□□□□□ -0.72
CLIC4-202ENST00000488683 C1orf229Q6ZS94 237 aaPredicted RBP10.58□□□□□ -0.72
CLIC4-202ENST00000488683 EDARADDQ8WWZ3 215 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 GPR61Q9BZJ8 451 aa10.58□□□□□ -0.72
CLIC4-202ENST00000488683 SEBOXQ9HB31 216 aaPredicted RBP10.58□□□□□ -0.72
CLIC4-202ENST00000488683 TRAV3A0A0B4J244 114 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HIST1H2BKO60814 126 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 ZNF737O75373 536 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 IGHG3P01860 377 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 CRYAAP02489 173 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HIST1H2BJP06899 126 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 SOD3P08294 240 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 P0C879 139 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HIST1H2BOP23527 126 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HIST1H2BBP33778 126 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HIST1H2BDP58876 126 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 UBE2G2P60604 165 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HIST1H2BCP62807 126 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HIST2H2BEQ16778 126 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.57□□□□□ -0.72
CLIC4-202ENST00000488683 NCR3LG1Q68D85 454 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 ACP7Q6ZNF0 438 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 TGIF2LYQ8IUE0 185 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 LRRC29Q8WV35 223 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 FRZBQ92765 325 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HIST1H2BHQ93079 126 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HIST1H2BNQ99877 126 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HIST1H2BMQ99879 126 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 PSMG3Q9BT73 122 aaPredicted RBP10.57□□□□□ -0.72
CLIC4-202ENST00000488683 ELOVL1Q9BW60 279 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 QTRT1Q9BXR0 403 aaKnown RBP10.57□□□□□ -0.72
CLIC4-202ENST00000488683 ZNRD1Q9P1U0 126 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 PGPEP1LA6NFU8 196 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 TMEM210A6NLX4 147 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 PROP1O75360 226 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 OR9G9P0C7N8 305 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 FGF7P21781 194 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 ZNF83P51522 516 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 DEFB109BQ30KR1 87 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 TMEM14EPQ6UXP3 125 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 ABHD5Q8WTS1 349 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 MBD3L1Q8WWY6 194 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 SLC39A9Q9NUM3 307 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 TRAV38-1A0A0B4J264 116 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 IFNA17P01571 189 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 CD81P60033 236 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HBG1P69891 147 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 HBG2P69892 147 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 NINJ1Q92982 152 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 SDSLQ96GA7 329 aa10.57□□□□□ -0.72
CLIC4-202ENST00000488683 CISD1Q9NZ45 108 aaKnown RBP10.57□□□□□ -0.72
CLIC4-202ENST00000488683 A0A087WWC5 75 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 SMCO3A2RU48 225 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 IFNL4K9M1U5 179 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 FCGR3BO75015 233 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 HNF1AP20823 631 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 EDDM3BP56851 147 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 C9orf152Q5JTZ5 239 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 C22orf34Q6ZV56 151 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 C1QL4Q86Z23 238 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 OR51G1Q8NGK1 321 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 TAAR6Q96RI8 345 aa10.56□□□□□ -0.72
CLIC4-202ENST00000488683 HSPB7Q9UBY9 170 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms