RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	RNF5	Q99942	180 aa		13.24	□□□□□ -0.29
SUN1-233	ENST00000488628	CABLES2	Q9BTV7	478 aa		13.24	□□□□□ -0.29
SUN1-233	ENST00000488628	FOXA2	Q9Y261	457 aa	Predicted RBP	13.24	□□□□□ -0.29
SUN1-233	ENST00000488628	TENM3	Q9P273	2699 aa		13.24	□□□□□ -0.29
SUN1-233	ENST00000488628	TRBV6-7	A0A0A0MS04	114 aa		13.23	□□□□□ -0.29
SUN1-233	ENST00000488628	CA2	P00918	260 aa		13.23	□□□□□ -0.29
SUN1-233	ENST00000488628	ECI1	P42126	302 aa		13.23	□□□□□ -0.29
SUN1-233	ENST00000488628	SSBP2	P81877	361 aa	Predicted RBP	13.23	□□□□□ -0.29
SUN1-233	ENST00000488628	ZNF616	Q08AN1	781 aa		13.23	□□□□□ -0.29
SUN1-233	ENST00000488628	ZNF260	Q3ZCT1	412 aa		13.23	□□□□□ -0.29
SUN1-233	ENST00000488628	OR2D2	Q9H210	308 aa		13.23	□□□□□ -0.29
SUN1-233	ENST00000488628	SDHAF2	Q9NX18	166 aa		13.23	□□□□□ -0.29
SUN1-233	ENST00000488628	NBEAL2	Q6ZNJ1	2754 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	ARPC1B	O15143	372 aa	Known RBP	13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	SLC25A17	O43808	307 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	IGLV2-23	P01705	113 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	PSMB9	P28065	219 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	RANBP1	P43487	201 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	MRPS15	P82914	257 aa	Known RBP	13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	UNQ5815/PRO19632	Q6UWF5	114 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	ZNF562	Q6V9R5	426 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	PDPN	Q86YL7	162 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	LFNG	Q8NES3	379 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	OR10J5	Q8NHC4	309 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	DCUN1D4	Q92564	292 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	MS4A10	Q96PG2	267 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	TSNAX	Q99598	290 aa	Known RBP	13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	B9D2	Q9BPU9	175 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	ATG5	Q9H1Y0	275 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	SLC35D1	Q9NTN3	355 aa		13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	TXNL4B	Q9NX01	149 aa	Known RBP	13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	LSM4	Q9Y4Z0	139 aa	Known RBP	13.22	□□□□□ -0.29
SUN1-233	ENST00000488628	MRPS14	O60783	128 aa	Known RBP	13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	RAMP3	O60896	148 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	APOA2	P02652	100 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	OR8U8	P0C7N1	319 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	GAL	P22466	123 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	GADD45A	P24522	165 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	SERPINB10	P48595	397 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	SLURP1	P55000	103 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	CD69	Q07108	199 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	PJVK	Q0ZLH3	352 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	ARFRP1	Q13795	201 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	ACTBL2	Q562R1	376 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	VAX1	Q5SQQ9	334 aa		13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	DLX4	Q92988	240 aa	Predicted RBP	13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	FLYWCH2	Q96CP2	140 aa	Known RBP	13.21	□□□□□ -0.29
SUN1-233	ENST00000488628	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.21	□□□□□ -0.3
SUN1-233	ENST00000488628	IGHV4OR15-8	A0A075B7B6	117 aa		13.2	□□□□□ -0.3
SUN1-233	ENST00000488628		A0A087WW49	117 aa		13.2	□□□□□ -0.3
SUN1-233	ENST00000488628	SRRM4	A7MD48	611 aa	Known RBP	13.2	□□□□□ -0.3
SUN1-233	ENST00000488628	SPDEF	O95238	335 aa		13.2	□□□□□ -0.3
SUN1-233	ENST00000488628	IGHV3-11	P01762	117 aa		13.2	□□□□□ -0.3
SUN1-233	ENST00000488628	CRYGB	P07316	175 aa		13.2	□□□□□ -0.3
SUN1-233	ENST00000488628	FGF9	P31371	208 aa	Predicted RBP	13.2	□□□□□ -0.3
SUN1-233	ENST00000488628	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.2	□□□□□ -0.3
SUN1-233	ENST00000488628	FXYD3	Q14802	87 aa		13.2	□□□□□ -0.3
SUN1-233	ENST00000488628	AKIRIN2	Q53H80	203 aa		13.2	□□□□□ -0.3
SUN1-233	ENST00000488628	STUB1	Q9UNE7	303 aa		13.2	□□□□□ -0.3
SUN1-233	ENST00000488628	METTL21EP	A6NDL7	271 aa		13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	NOTO	A8MTQ0	251 aa		13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	LGALS1	P09382	135 aa	Known RBP	13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	MRGPRG-AS1	Q2M3A8	158 aa		13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	CDNF	Q49AH0	187 aa		13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	TCTEX1D1	Q8N7M0	179 aa		13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	BVES	Q8NE79	360 aa		13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	GRPEL2	Q8TAA5	225 aa		13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	ARPC1A	Q92747	370 aa		13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	OR51E2	Q9H255	320 aa		13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	RNF167	Q9H6Y7	350 aa		13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	ZMAT5	Q9UDW3	170 aa	Known RBP	13.19	□□□□□ -0.3
SUN1-233	ENST00000488628	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.18	□□□□□ -0.3
SUN1-233	ENST00000488628	LINC01619	G3V211	115 aa		13.18	□□□□□ -0.3
SUN1-233	ENST00000488628		J3QRK9	145 aa		13.18	□□□□□ -0.3
SUN1-233	ENST00000488628	OVOL1	O14753	267 aa		13.18	□□□□□ -0.3
SUN1-233	ENST00000488628	CLEC2L	P0C7M8	214 aa		13.18	□□□□□ -0.3
SUN1-233	ENST00000488628	TALDO1	P37837	337 aa		13.18	□□□□□ -0.3
SUN1-233	ENST00000488628	TPPP2	P59282	170 aa		13.18	□□□□□ -0.3
SUN1-233	ENST00000488628		Q6ZS49	121 aa		13.18	□□□□□ -0.3
SUN1-233	ENST00000488628	OR5T1	Q8NG75	326 aa		13.18	□□□□□ -0.3
SUN1-233	ENST00000488628	RHOV	Q96L33	236 aa		13.18	□□□□□ -0.3
SUN1-233	ENST00000488628	GINS4	Q9BRT9	223 aa		13.18	□□□□□ -0.3
SUN1-233	ENST00000488628	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
SUN1-233	ENST00000488628	DAPK2	Q9UIK4	370 aa		13.18	□□□□□ -0.3
SUN1-233	ENST00000488628	LINC00473	A8K010	186 aa		13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	DIRAS3	O95661	229 aa		13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	TMEM177	Q53S58	311 aa		13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	NUDCD2	Q8WVJ2	157 aa		13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	DDB2	Q92466	427 aa		13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	HARBI1	Q96MB7	349 aa		13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	ST6GALNAC5	Q9BVH7	336 aa		13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	RRP15	Q9Y3B9	282 aa	Known RBP	13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	RBM7	Q9Y580	266 aa	Known RBP	13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	STAB2	Q8WWQ8	2551 aa		13.17	□□□□□ -0.3
SUN1-233	ENST00000488628	TMEM235	A6NFC5	223 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms