RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 HLA-DQB1P01920 261 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 RPLP1P05386 114 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 ELANEP08246 267 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 PF4V1P10720 104 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 PSMB8P28062 276 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 RPS16P62249 146 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 CX3CL1P78423 397 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 CTF1Q16619 201 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 BEAN1Q3B7T3 259 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 C19orf54Q5BKX5 351 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 KPRPQ5T749 579 aaPredicted RBP12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 ZNF660Q6AZW8 331 aaPredicted RBP12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 HOGA1Q86XE5 327 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 DDB2Q92466 427 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 KCTD12Q96CX2 325 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 S100A16Q96FQ6 103 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 SLC35D1Q9NTN3 355 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 WSB1Q9Y6I7 421 aa12.48□□□□□ -0.41
CTDSP1-209ENST00000488627 IGKV1D-13A0A0B4J2D9 117 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 GABARAPO95166 117 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 APOA2P02652 100 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 CRYGBP07316 175 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 IGKV1-13P0DP09 117 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 VDAC1P21796 283 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 DUTP33316 252 aaKnown RBP12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 ALDH3B2P48448 385 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 CRIP2P52943 208 aaPredicted RBP12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 KIAA0141Q14154 515 aaPredicted RBP12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 OXLD1Q5BKU9 147 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 UBE2NLQ5JXB2 153 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 SAMD12Q8N8I0 201 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 MINDY2Q8NBR6 621 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 BEST4Q8NFU0 473 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 MYOZ3Q8TDC0 251 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 FLYWCH2Q96CP2 140 aaKnown RBP12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 PARP11Q9NR21 331 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 RBM7Q9Y580 266 aaKnown RBP12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 NUBP2Q9Y5Y2 271 aa12.47□□□□□ -0.41
CTDSP1-209ENST00000488627 SRRM4A7MD48 611 aaKnown RBP12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 LINC00473A8K010 186 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 J3QRK9 145 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 SPDEFO95238 335 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 IGLV1-40P01703 118 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 OR5H8P0DN80 308 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 THBS3P49746 956 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 LUMP51884 338 aaPredicted RBP12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 CXorf66Q5JRM2 361 aaPredicted RBP12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 ZNF562Q6V9R5 426 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 C8orf86Q6ZUL3 223 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 ZNF695Q8IW36 515 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 BVESQ8NE79 360 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 SNAPC3Q92966 411 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 TSNAXQ99598 290 aaKnown RBP12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 MRPS26Q9BYN8 205 aaKnown RBP12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 KLK15Q9H2R5 256 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 TPSG1Q9NRR2 321 aa12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 METTL1Q9UBP6 276 aaKnown RBP12.46□□□□□ -0.41
CTDSP1-209ENST00000488627 TRAV41A0A0B4J266 112 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 PF4P02776 101 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 EIF4EP06730 217 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 SLC6A1P30531 599 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 CDX1P47902 265 aaPredicted RBP12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 LGALS7P47929 136 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 SSBP2P81877 361 aaPredicted RBP12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 TAGLNQ01995 201 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 EIF4EBP1Q13541 118 aaPredicted RBP12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 TMEM177Q53S58 311 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 GPR107Q5VW38 600 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 MRPL41Q8IXM3 137 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 ZNF645Q8N7E2 425 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 LINC00482Q8N8I6 264 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 KLHL30-AS1Q8NEE0 82 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 ADTRPQ96IZ2 230 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 CLCC1Q96S66 551 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 P2RX4Q99571 388 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 ANAPC10Q9UM13 185 aa12.45□□□□□ -0.42
CTDSP1-209ENST00000488627 SLC25A17O43808 307 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 SOX15O60248 233 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 FCER2P06734 321 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 MYCNOSP40205 109 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 CBX5P45973 191 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 TAS2R20P59543 309 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 RPL30P62888 115 aaKnown RBP12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 PLGLAQ15195 96 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 MRGPRG-AS1Q2M3A8 158 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 PDLIM3Q53GG5 364 aaPredicted RBP12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 RAX2Q96IS3 184 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 CMTM3Q96MX0 182 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 COMMD3Q9UBI1 195 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 RBMX2Q9Y388 322 aaKnown RBP12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 PLXNB1O43157 2135 aa12.44□□□□□ -0.42
CTDSP1-209ENST00000488627 MEIS3P1A6NDR6 274 aa12.43□□□□□ -0.42
CTDSP1-209ENST00000488627 NUDT19A8MXV4 375 aa12.43□□□□□ -0.42
CTDSP1-209ENST00000488627 ARPC1BO15143 372 aaKnown RBP12.43□□□□□ -0.42
CTDSP1-209ENST00000488627 SLC22A5O76082 557 aa12.43□□□□□ -0.42
CTDSP1-209ENST00000488627 CA2P00918 260 aa12.43□□□□□ -0.42
CTDSP1-209ENST00000488627 APOA1P02647 267 aa12.43□□□□□ -0.42
CTDSP1-209ENST00000488627 RRASP10301 218 aa12.43□□□□□ -0.42
CTDSP1-209ENST00000488627 IGLL1P15814 213 aa12.43□□□□□ -0.42
CTDSP1-209ENST00000488627 CD33P20138 364 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms