RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.49■□□□□ 0.39
PTPN4-211ENST00000488279 LFNGQ8NES3 379 aa17.49■□□□□ 0.39
PTPN4-211ENST00000488279 DLX4Q92988 240 aaPredicted RBP17.49■□□□□ 0.39
PTPN4-211ENST00000488279 CNBD2Q96M20 576 aa17.49■□□□□ 0.39
PTPN4-211ENST00000488279 M0R1X1 148 aa17.48■□□□□ 0.39
PTPN4-211ENST00000488279 LY86O95711 162 aa17.48■□□□□ 0.39
PTPN4-211ENST00000488279 GADD45AP24522 165 aa17.48■□□□□ 0.39
PTPN4-211ENST00000488279 SSX1Q16384 188 aa17.48■□□□□ 0.39
PTPN4-211ENST00000488279 OR10J5Q8NHC4 309 aa17.48■□□□□ 0.39
PTPN4-211ENST00000488279 MS4A10Q96PG2 267 aa17.48■□□□□ 0.39
PTPN4-211ENST00000488279 KMT2CQ8NEZ4 4911 aaKnown RBP17.47■□□□□ 0.39
PTPN4-211ENST00000488279 IFITM5A6NNB3 132 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 BET1O15155 118 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 OR8U9P0C7N5 309 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 SLURP1P55000 103 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 OR10A3P58181 314 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 MOGAT2Q3SYC2 334 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 OR10R2Q8NGX6 335 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 ARPC1AQ92747 370 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 SLA2Q9H6Q3 261 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 TPSG1Q9NRR2 321 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 SLC35D1Q9NTN3 355 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 U3KQK5 164 aa17.47■□□□□ 0.39
PTPN4-211ENST00000488279 SLC25A17O43808 307 aa17.46■□□□□ 0.39
PTPN4-211ENST00000488279 SAP30O75446 220 aa17.46■□□□□ 0.39
PTPN4-211ENST00000488279 HSPB1P04792 205 aaKnown RBP17.46■□□□□ 0.39
PTPN4-211ENST00000488279 FCGR3AP08637 254 aa17.46■□□□□ 0.39
PTPN4-211ENST00000488279 GSTT2P0CG29 244 aa17.46■□□□□ 0.39
PTPN4-211ENST00000488279 GSTT2BP0CG30 244 aa17.46■□□□□ 0.39
PTPN4-211ENST00000488279 SNRPBP14678 240 aaKnown RBP17.46■□□□□ 0.39
PTPN4-211ENST00000488279 GNB3P16520 340 aa17.46■□□□□ 0.39
PTPN4-211ENST00000488279 MYL9P24844 172 aa17.46■□□□□ 0.39
PTPN4-211ENST00000488279 TPPP2P59282 170 aa17.46■□□□□ 0.39
PTPN4-211ENST00000488279 FXYD3Q14802 87 aa17.46■□□□□ 0.39
PTPN4-211ENST00000488279 IGSF11Q5DX21 431 aa17.46■□□□□ 0.39
PTPN4-211ENST00000488279 NDUFB11Q9NX14 153 aa17.46■□□□□ 0.39
PTPN4-211ENST00000488279 IGHV4OR15-8A0A075B7B6 117 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 A0A087WW49 117 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 TRBV6-7A0A0A0MS04 114 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 TRDV1A0A1B0GX56 115 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 CNIH1O95406 144 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 IGHV3-11P01762 117 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 RAB6AP20340 208 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 LGALS7P47929 136 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 GRPEL2Q8TAA5 225 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 CABLES2Q9BTV7 478 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 OR2D2Q9H210 308 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 SDHAF2Q9NX18 166 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 SMAD5-AS1Q9Y6J3 95 aa17.45■□□□□ 0.38
PTPN4-211ENST00000488279 A0A075B6Q4 140 aa17.44■□□□□ 0.38
PTPN4-211ENST00000488279 SHISA3A0PJX4 238 aa17.44■□□□□ 0.38
PTPN4-211ENST00000488279 METTL21EPA6NDL7 271 aa17.44■□□□□ 0.38
PTPN4-211ENST00000488279 RAB27BO00194 218 aa17.44■□□□□ 0.38
PTPN4-211ENST00000488279 DIRAS3O95661 229 aa17.44■□□□□ 0.38
PTPN4-211ENST00000488279 RAB3BP20337 219 aa17.44■□□□□ 0.38
PTPN4-211ENST00000488279 TAGLNQ01995 201 aaKnown RBP17.44■□□□□ 0.38
PTPN4-211ENST00000488279 RHOVQ96L33 236 aa17.44■□□□□ 0.38
PTPN4-211ENST00000488279 ASCL2Q99929 193 aa17.44■□□□□ 0.38
PTPN4-211ENST00000488279 CENPOQ9BU64 300 aa17.44■□□□□ 0.38
PTPN4-211ENST00000488279 ZNF355PQ9NSJ1 428 aa17.44■□□□□ 0.38
PTPN4-211ENST00000488279 ZNF230Q9UIE0 474 aaPredicted RBP17.44■□□□□ 0.38
PTPN4-211ENST00000488279 RBM7Q9Y580 266 aaKnown RBP17.44■□□□□ 0.38
PTPN4-211ENST00000488279 MFNGO00587 321 aa17.43■□□□□ 0.38
PTPN4-211ENST00000488279 ARPC1BO15143 372 aaKnown RBP17.43■□□□□ 0.38
PTPN4-211ENST00000488279 TRGV3P03979 118 aa17.43■□□□□ 0.38
PTPN4-211ENST00000488279 HIST1H1DP16402 221 aaKnown RBP17.43■□□□□ 0.38
PTPN4-211ENST00000488279 GALP22466 123 aa17.43■□□□□ 0.38
PTPN4-211ENST00000488279 TALDO1P37837 337 aa17.43■□□□□ 0.38
PTPN4-211ENST00000488279 CBX3Q13185 183 aa17.43■□□□□ 0.38
PTPN4-211ENST00000488279 ARFRP1Q13795 201 aa17.43■□□□□ 0.38
PTPN4-211ENST00000488279 ACSM6Q6P461 480 aa17.43■□□□□ 0.38
PTPN4-211ENST00000488279 GINS4Q9BRT9 223 aa17.43■□□□□ 0.38
PTPN4-211ENST00000488279 RAB26Q9ULW5 256 aa17.43■□□□□ 0.38
PTPN4-211ENST00000488279 IGLV2-23P01705 113 aa17.42■□□□□ 0.38
PTPN4-211ENST00000488279 OR5T1Q8NG75 326 aa17.42■□□□□ 0.38
PTPN4-211ENST00000488279 OR6Q1Q8NGQ2 317 aa17.42■□□□□ 0.38
PTPN4-211ENST00000488279 MAFIPQ8WZ33 124 aa17.42■□□□□ 0.38
PTPN4-211ENST00000488279 A0A0B4J203 849 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 H3BUA1 57 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 CRYGBP07316 175 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 PITPNAQ00169 270 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 PJVKQ0ZLH3 352 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 SRSF7Q16629 238 aaKnown RBP eCLIP17.41■□□□□ 0.382e-8■■■■■ 27
PTPN4-211ENST00000488279 RTL8BQ17RB0 113 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 C22orf42Q6IC83 251 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 POC5Q8NA72 575 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 HARBI1Q96MB7 349 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 TMEM68Q96MH6 324 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 OR4C12Q96R67 309 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 ATG5Q9H1Y0 275 aa17.41■□□□□ 0.38
PTPN4-211ENST00000488279 A0A0G2JLM5 398 aa17.4■□□□□ 0.38
PTPN4-211ENST00000488279 C13orf42A0A1B0GVH6 325 aa17.4■□□□□ 0.38
PTPN4-211ENST00000488279 SHOXO15266 292 aa17.4■□□□□ 0.38
PTPN4-211ENST00000488279 MRPS14O60783 128 aaKnown RBP17.4■□□□□ 0.38
PTPN4-211ENST00000488279 RRASP10301 218 aa17.4■□□□□ 0.38
PTPN4-211ENST00000488279 SPNP16150 400 aa17.4■□□□□ 0.38
PTPN4-211ENST00000488279 ARL6IP1Q15041 203 aa17.4■□□□□ 0.38
PTPN4-211ENST00000488279 BVESQ8NE79 360 aa17.4■□□□□ 0.38
PTPN4-211ENST00000488279 RANGRFQ9HD47 186 aaPredicted RBP17.4■□□□□ 0.38
PTPN4-211ENST00000488279 GABARAPL2P60520 117 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms