RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SLC25A38Q96DW6 304 aa18.56■□□□□ 0.56
RNF38-208ENST00000488058 TSNAXQ99598 290 aaKnown RBP18.56■□□□□ 0.56
RNF38-208ENST00000488058 RNF5Q99942 180 aa18.56■□□□□ 0.56
RNF38-208ENST00000488058 NECAP2Q9NVZ3 263 aa18.56■□□□□ 0.56
RNF38-208ENST00000488058 FCN1O00602 326 aa18.55■□□□□ 0.56
RNF38-208ENST00000488058 SCAND1P57086 179 aa18.55■□□□□ 0.56
RNF38-208ENST00000488058 CX3CL1P78423 397 aa18.55■□□□□ 0.56
RNF38-208ENST00000488058 NDPQ00604 133 aa18.55■□□□□ 0.56
RNF38-208ENST00000488058 FLYWCH2Q96CP2 140 aaKnown RBP18.55■□□□□ 0.56
RNF38-208ENST00000488058 YIPF6Q96EC8 236 aa18.55■□□□□ 0.56
RNF38-208ENST00000488058 FBXO7Q9Y3I1 522 aa18.55■□□□□ 0.56
RNF38-208ENST00000488058 NOTCH3Q9UM47 2321 aa18.54■□□□□ 0.56
RNF38-208ENST00000488058 TRAV18A0A075B6X5 111 aa18.54■□□□□ 0.56
RNF38-208ENST00000488058 PSMB8P28062 276 aa18.54■□□□□ 0.56
RNF38-208ENST00000488058 PPIFP30405 207 aaKnown RBP18.54■□□□□ 0.56
RNF38-208ENST00000488058 CDX1P47902 265 aaPredicted RBP18.54■□□□□ 0.56
RNF38-208ENST00000488058 ZNF660Q6AZW8 331 aaPredicted RBP18.54■□□□□ 0.56
RNF38-208ENST00000488058 RNF152Q8N8N0 203 aa18.54■□□□□ 0.56
RNF38-208ENST00000488058 C5orf30Q96GV9 206 aa18.54■□□□□ 0.56
RNF38-208ENST00000488058 RAX2Q96IS3 184 aa18.54■□□□□ 0.56
RNF38-208ENST00000488058 DCSTAMPQ9H295 470 aa18.54■□□□□ 0.56
RNF38-208ENST00000488058 GAB2Q9UQC2 676 aa18.54■□□□□ 0.56
RNF38-208ENST00000488058 A0A1W2PN81 502 aa18.53■□□□□ 0.56
RNF38-208ENST00000488058 CCL24O00175 119 aa18.53■□□□□ 0.56
RNF38-208ENST00000488058 SLC25A17O43808 307 aa18.53■□□□□ 0.56
RNF38-208ENST00000488058 SSX5O60225 188 aa18.53■□□□□ 0.56
RNF38-208ENST00000488058 DUS4LO95620 317 aaKnown RBP18.53■□□□□ 0.56
RNF38-208ENST00000488058 CA2P00918 260 aa18.53■□□□□ 0.56
RNF38-208ENST00000488058 CHRNA7P36544 502 aa18.53■□□□□ 0.56
RNF38-208ENST00000488058 CBX3Q13185 183 aa18.53■□□□□ 0.56
RNF38-208ENST00000488058 REC114Q7Z4M0 266 aa18.53■□□□□ 0.56
RNF38-208ENST00000488058 BVESQ8NE79 360 aa18.53■□□□□ 0.56
RNF38-208ENST00000488058 P2RX4Q99571 388 aa18.53■□□□□ 0.56
RNF38-208ENST00000488058 FAM103A1Q9BTL3 118 aaKnown RBP18.53■□□□□ 0.56
RNF38-208ENST00000488058 KLK15Q9H2R5 256 aa18.53■□□□□ 0.56
RNF38-208ENST00000488058 AURKAIP1Q9NWT8 199 aaPredicted RBP18.53■□□□□ 0.56
RNF38-208ENST00000488058 SPDEFO95238 335 aa18.52■□□□□ 0.56
RNF38-208ENST00000488058 CTXN2P0C2S0 81 aa18.52■□□□□ 0.56
RNF38-208ENST00000488058 NFYAP23511 347 aaPredicted RBP18.52■□□□□ 0.56
RNF38-208ENST00000488058 TPSG1Q9NRR2 321 aa18.52■□□□□ 0.56
RNF38-208ENST00000488058 CNIH2Q6PI25 160 aa18.51■□□□□ 0.55
RNF38-208ENST00000488058 PPP1R27Q86WC6 154 aa18.51■□□□□ 0.55
RNF38-208ENST00000488058 MRAPQ8TCY5 172 aa18.51■□□□□ 0.55
RNF38-208ENST00000488058 C4orf3Q8WVX3 66 aa18.51■□□□□ 0.55
RNF38-208ENST00000488058 HARBI1Q96MB7 349 aa18.51■□□□□ 0.55
RNF38-208ENST00000488058 OR5B12Q96R08 314 aa18.51■□□□□ 0.55
RNF38-208ENST00000488058 DIABLOQ9NR28 239 aa18.51■□□□□ 0.55
RNF38-208ENST00000488058 SPATA2Q9UM82 520 aa18.51■□□□□ 0.55
RNF38-208ENST00000488058 IGLV1-40P01703 118 aa18.5■□□□□ 0.55
RNF38-208ENST00000488058 HOXD3P31249 432 aaPredicted RBP18.5■□□□□ 0.55
RNF38-208ENST00000488058 RPS19P39019 145 aaKnown RBP18.5■□□□□ 0.55
RNF38-208ENST00000488058 LUMP51884 338 aaPredicted RBP18.5■□□□□ 0.55
RNF38-208ENST00000488058 RTL8BQ17RB0 113 aa18.5■□□□□ 0.55
RNF38-208ENST00000488058 UNQ5815/PRO19632Q6UWF5 114 aa18.5■□□□□ 0.55
RNF38-208ENST00000488058 CROCCP3Q8IVE0 287 aa18.5■□□□□ 0.55
RNF38-208ENST00000488058 DPF1Q92782 380 aa18.5■□□□□ 0.55
RNF38-208ENST00000488058 ANXA10Q9UJ72 324 aa18.5■□□□□ 0.55
RNF38-208ENST00000488058 FOXA2Q9Y261 457 aaPredicted RBP18.5■□□□□ 0.55
RNF38-208ENST00000488058 SHOXO15266 292 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 FCER2P06734 321 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 ARPC4P59998 168 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 GNB1P62873 340 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 TMEM267Q0VDI3 215 aaPredicted RBP18.49■□□□□ 0.55
RNF38-208ENST00000488058 ZNF562Q6V9R5 426 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 MINDY2Q8NBR6 621 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 GRPEL2Q8TAA5 225 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 CASTOR1Q8WTX7 329 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 ADTRPQ96IZ2 230 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 MCRIP2Q9BUT9 160 aaKnown RBP18.49■□□□□ 0.55
RNF38-208ENST00000488058 GPR61Q9BZJ8 451 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 GNB4Q9HAV0 340 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 OR2W1Q9Y3N9 320 aa18.49■□□□□ 0.55
RNF38-208ENST00000488058 A0A0A6YYH2 397 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 A6NJ64 397 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 EGR2P11161 476 aaPredicted RBP18.48■□□□□ 0.55
RNF38-208ENST00000488058 PTHLHP12272 177 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 DUTP33316 252 aaKnown RBP18.48■□□□□ 0.55
RNF38-208ENST00000488058 LGALS7P47929 136 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 RAB9AP51151 201 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 CRIP2P52943 208 aaPredicted RBP18.48■□□□□ 0.55
RNF38-208ENST00000488058 TAGLNQ01995 201 aaKnown RBP18.48■□□□□ 0.55
RNF38-208ENST00000488058 GVQW1Q8N7I0 195 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 ZNF491Q8N8L2 437 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 LFNGQ8NES3 379 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 BEST4Q8NFU0 473 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 MYOZ3Q8TDC0 251 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 ARPC1AQ92747 370 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 UBE2E2Q96LR5 201 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 VSIG4Q9Y279 399 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 NUBP2Q9Y5Y2 271 aa18.48■□□□□ 0.55
RNF38-208ENST00000488058 LINC00473A8K010 186 aa18.47■□□□□ 0.55
RNF38-208ENST00000488058 SOX15O60248 233 aa18.47■□□□□ 0.55
RNF38-208ENST00000488058 TMEM127O75204 238 aa18.47■□□□□ 0.55
RNF38-208ENST00000488058 CNIH1O95406 144 aa18.47■□□□□ 0.55
RNF38-208ENST00000488058 IGLV2-23P01705 113 aa18.47■□□□□ 0.55
RNF38-208ENST00000488058 RRASP10301 218 aa18.47■□□□□ 0.55
RNF38-208ENST00000488058 FXYD3Q14802 87 aa18.47■□□□□ 0.55
RNF38-208ENST00000488058 ACTBL2Q562R1 376 aa18.47■□□□□ 0.55
RNF38-208ENST00000488058 C19orf54Q5BKX5 351 aa18.47■□□□□ 0.55
RNF38-208ENST00000488058 ZNF645Q8N7E2 425 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms