RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 SLURP1P55000 103 aa8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 DCTN2Q13561 401 aaKnown RBP8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 PLGLAQ15195 96 aa8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ZNF260Q3ZCT1 412 aa8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 UBE2UQ5VVX9 321 aa8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 TMEM65Q6PI78 240 aa8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 OR1N2Q8NGR9 330 aa8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 OR10R2Q8NGX6 335 aa8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 RNF5Q99942 180 aa8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 OR2D2Q9H210 308 aa8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 SDHAF2Q9NX18 166 aa8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 METTL1Q9UBP6 276 aaKnown RBP8.67□□□□□ -1.02
RAB11FIP3-210ENST00000487899 CSMD3Q7Z407 3707 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 IGHV4OR15-8A0A075B7B6 117 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 A0A087WW49 117 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 PDCD5O14737 125 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 BET1O15155 118 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 SLC25A17O43808 307 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 GSTT2P0CG29 244 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 GSTT2BP0CG30 244 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 RAB3BP20337 219 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 RAB6AP20340 208 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 GALP22466 123 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 MYL9P24844 172 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ECI1P42126 302 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 SERPINB10P48595 397 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 PSMD7P51665 324 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 MRGPRG-AS1Q2M3A8 158 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ACTBL2Q562R1 376 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 C22orf42Q6IC83 251 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 PPP1R27Q86WC6 154 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ARPC1AQ92747 370 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ZNF230Q9UIE0 474 aaPredicted RBP8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ZNF221Q9UK13 617 aa8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ELF5Q9UKW6 265 aaPredicted RBP8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ZNF256Q9Y2P7 627 aaPredicted RBP8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 DYNC2H1Q8NCM8 4307 aaKnown RBP8.66□□□□□ -1.02
RAB11FIP3-210ENST00000487899 A0A075B6Q4 140 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ATP6V1G2O95670 118 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 APOA2P02652 100 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 CRYGBP07316 175 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 GADD45AP24522 165 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 PJVKQ0ZLH3 352 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 AKIRIN2Q53H80 203 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 PYHIN1Q6K0P9 492 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 UNQ5815/PRO19632Q6UWF5 114 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ZNF562Q6V9R5 426 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 Q6ZS49 121 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 LFNGQ8NES3 379 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 GRPEL2Q8TAA5 225 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ABHD5Q8WTS1 349 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 DDB2Q92466 427 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 DCUN1D4Q92564 292 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 DLX4Q92988 240 aaPredicted RBP8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 HARBI1Q96MB7 349 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 CLCC1Q96S66 551 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 TSNAXQ99598 290 aaKnown RBP8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 SLC35D1Q9NTN3 355 aa8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 ZMAT5Q9UDW3 170 aaKnown RBP8.65□□□□□ -1.02
RAB11FIP3-210ENST00000487899 LYSTQ99698 3801 aa8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 LINC01619G3V211 115 aa8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 OVOL1O14753 267 aa8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 MRPS14O60783 128 aaKnown RBP8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 IGHV3-11P01762 117 aa8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 OR8U9P0C7N5 309 aa8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 FGF9P31371 208 aaPredicted RBP8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 TPPP2P59282 170 aa8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 H1FOOQ8IZA3 346 aaPredicted RBP8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 SPARTQ8N0X7 666 aa8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 OR10J5Q8NHC4 309 aa8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 TXNL4BQ9NX01 149 aaKnown RBP8.64□□□□□ -1.03
RAB11FIP3-210ENST00000487899 LINC00473A8K010 186 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 PSMB9P28065 219 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 RANBP1P43487 201 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 INSL3P51460 131 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 RPS16P62249 146 aaKnown RBP8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 MRPS15P82914 257 aaKnown RBP8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 DEFA5Q01523 94 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 FXYD3Q14802 87 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 SRSF7Q16629 238 aaKnown RBP eCLIP8.63□□□□□ -1.035e-8■■□□□ 12.3
RAB11FIP3-210ENST00000487899 TMEM177Q53S58 311 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 ACSM6Q6P461 480 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 POC5Q8NA72 575 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 LGALS14Q8TCE9 139 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 FLYWCH2Q96CP2 140 aaKnown RBP8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 MS4A10Q96PG2 267 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 SLA2Q9H6Q3 261 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 STARD9Q9P2P6 4700 aa8.63□□□□□ -1.03
RAB11FIP3-210ENST00000487899 TMEM235A6NFC5 223 aa8.62□□□□□ -1.03
RAB11FIP3-210ENST00000487899 SRRM4A7MD48 611 aaKnown RBP8.62□□□□□ -1.03
RAB11FIP3-210ENST00000487899 NOTOA8MTQ0 251 aa8.62□□□□□ -1.03
RAB11FIP3-210ENST00000487899 SAP30O75446 220 aa8.62□□□□□ -1.03
RAB11FIP3-210ENST00000487899 RBMXL2O75526 392 aaKnown RBP8.62□□□□□ -1.03
RAB11FIP3-210ENST00000487899 TRGV3P03979 118 aa8.62□□□□□ -1.03
RAB11FIP3-210ENST00000487899 DTYMKP23919 212 aa8.62□□□□□ -1.03
RAB11FIP3-210ENST00000487899 DUTP33316 252 aaKnown RBP8.62□□□□□ -1.03
RAB11FIP3-210ENST00000487899 TMEM267Q0VDI3 215 aaPredicted RBP8.62□□□□□ -1.03
RAB11FIP3-210ENST00000487899 ARFRP1Q13795 201 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms