RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CIB3Q96Q77 187 aaPredicted RBP21.78■■□□□ 1.08
HLA-C-208ENST00000487245 AGMATQ9BSE5 352 aa21.78■■□□□ 1.08
HLA-C-208ENST00000487245 WASF3Q9UPY6 502 aa21.78■■□□□ 1.08
HLA-C-208ENST00000487245 SRRM5B3KS81 715 aa21.77■■□□□ 1.08
HLA-C-208ENST00000487245 IGHV3-13P01766 116 aa21.77■■□□□ 1.08
HLA-C-208ENST00000487245 G6PCP35575 357 aa21.77■■□□□ 1.08
HLA-C-208ENST00000487245 ZNF83P51522 516 aa21.77■■□□□ 1.08
HLA-C-208ENST00000487245 S1PR2O95136 353 aa21.77■■□□□ 1.08
HLA-C-208ENST00000487245 MBP02144 154 aa21.77■■□□□ 1.08
HLA-C-208ENST00000487245 ZNF474Q6S9Z5 364 aaPredicted RBP21.77■■□□□ 1.08
HLA-C-208ENST00000487245 CD177Q8N6Q3 437 aa21.77■■□□□ 1.08
HLA-C-208ENST00000487245 METRNQ9UJH8 293 aa21.77■■□□□ 1.08
HLA-C-208ENST00000487245 FAM215AQ9Y5M1 114 aa21.77■■□□□ 1.08
HLA-C-208ENST00000487245 C17orf98A8MV24 154 aa21.76■■□□□ 1.07
HLA-C-208ENST00000487245 KRASP01116 189 aa21.76■■□□□ 1.07
HLA-C-208ENST00000487245 CRYAAP02489 173 aa21.76■■□□□ 1.07
HLA-C-208ENST00000487245 GZMHP20718 246 aa21.76■■□□□ 1.07
HLA-C-208ENST00000487245 GLRXP35754 106 aa21.76■■□□□ 1.07
HLA-C-208ENST00000487245 FGF8P55075 233 aaPredicted RBP21.76■■□□□ 1.07
HLA-C-208ENST00000487245 ZNF674Q2M3X9 581 aa21.76■■□□□ 1.07
HLA-C-208ENST00000487245 VWC2Q2TAL6 325 aa21.76■■□□□ 1.07
HLA-C-208ENST00000487245 OR13A1Q8NGR1 328 aa21.76■■□□□ 1.07
HLA-C-208ENST00000487245 CTDSP1Q9GZU7 261 aa21.76■■□□□ 1.07
HLA-C-208ENST00000487245 SLC39A9Q9NUM3 307 aa21.76■■□□□ 1.07
HLA-C-208ENST00000487245 M0R1B8 84 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 ZNF816Q0VGE8 651 aaPredicted RBP21.75■■□□□ 1.07
HLA-C-208ENST00000487245 OR8G2PQ6IF36 304 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 ZNF808Q8N4W9 903 aaPredicted RBP21.75■■□□□ 1.07
HLA-C-208ENST00000487245 RPP25LQ8N5L8 163 aaKnown RBP21.75■■□□□ 1.07
HLA-C-208ENST00000487245 S100PBPQ96BU1 408 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 SNX22Q96L94 193 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 HSD17B10Q99714 261 aaKnown RBP21.75■■□□□ 1.07
HLA-C-208ENST00000487245 SFXN3Q9BWM7 321 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 DUSP13Q9UII6 198 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 INTS1Q8N201 2190 aaKnown RBP21.75■■□□□ 1.07
HLA-C-208ENST00000487245 TGIF2-C20orf24A0A0A6YYL0 155 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 CLDN34H7C241 214 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 TM4SF5O14894 197 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 CDX1P47902 265 aaPredicted RBP21.75■■□□□ 1.07
HLA-C-208ENST00000487245 KRTCAP3Q53RY4 240 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 KIAA2026Q5HYC2 2103 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 LHX4Q969G2 390 aa21.75■■□□□ 1.07
HLA-C-208ENST00000487245 COL25A1Q9BXS0 654 aaPredicted RBP21.75■■□□□ 1.07
HLA-C-208ENST00000487245 CTXND1A0A1B0GTU2 59 aa21.74■■□□□ 1.07
HLA-C-208ENST00000487245 CEBPZOSA8MTT3 80 aa21.74■■□□□ 1.07
HLA-C-208ENST00000487245 C15orf65H3BRN8 121 aa21.74■■□□□ 1.07
HLA-C-208ENST00000487245 ZNF737O75373 536 aa21.74■■□□□ 1.07
HLA-C-208ENST00000487245 ELLP55199 621 aaPredicted RBP21.74■■□□□ 1.07
HLA-C-208ENST00000487245 WDR25Q64LD2 544 aaPredicted RBP21.74■■□□□ 1.07
HLA-C-208ENST00000487245 DTD1Q8TEA8 209 aa21.74■■□□□ 1.07
HLA-C-208ENST00000487245 EDARADDQ8WWZ3 215 aa21.74■■□□□ 1.07
HLA-C-208ENST00000487245 MGST3O14880 152 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 LY86O95711 162 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 IGKV1D-33P01593 117 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 IGKV1-33P01594 117 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 KLF3P57682 345 aaPredicted RBP21.73■■□□□ 1.07
HLA-C-208ENST00000487245 ACSM6Q6P461 480 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 C1orf87Q8N0U7 546 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 OR51M1Q9H341 326 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 NIT2Q9NQR4 276 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 CLN8Q9UBY8 286 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 MDKP21741 143 aaPredicted RBP21.73■■□□□ 1.07
HLA-C-208ENST00000487245 GTF3C1Q12789 2109 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 RBMXL3Q8N7X1 1067 aaKnown RBP21.73■■□□□ 1.07
HLA-C-208ENST00000487245 OR10P1Q8NGE3 313 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 GSN-AS1Q9NRJ2 163 aa21.73■■□□□ 1.07
HLA-C-208ENST00000487245 TFF1P04155 84 aa21.72■■□□□ 1.07
HLA-C-208ENST00000487245 FABP1P07148 127 aa21.72■■□□□ 1.07
HLA-C-208ENST00000487245 SSTR5P35346 364 aa21.72■■□□□ 1.07
HLA-C-208ENST00000487245 GNB2P62879 340 aa21.72■■□□□ 1.07
HLA-C-208ENST00000487245 NKX6-1P78426 367 aaPredicted RBP21.72■■□□□ 1.07
HLA-C-208ENST00000487245 HOXA4Q00056 320 aaPredicted RBP21.72■■□□□ 1.07
HLA-C-208ENST00000487245 CR1LQ2VPA4 569 aa21.72■■□□□ 1.07
HLA-C-208ENST00000487245 AARDQ4LEZ3 155 aa21.72■■□□□ 1.07
HLA-C-208ENST00000487245 OR2B11Q5JQS5 317 aa21.72■■□□□ 1.07
HLA-C-208ENST00000487245 H2BFWTQ7Z2G1 175 aa21.72■■□□□ 1.07
HLA-C-208ENST00000487245 LRP11Q86VZ4 500 aa21.72■■□□□ 1.07
HLA-C-208ENST00000487245 ATXN7O15265 892 aaPredicted RBP21.71■■□□□ 1.07
HLA-C-208ENST00000487245 EGR1P18146 543 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 CEACAM8P31997 349 aaPredicted RBP21.71■■□□□ 1.07
HLA-C-208ENST00000487245 MSMPQ1L6U9 139 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 NCMAPQ5T1S8 102 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 FAM53AQ6NSI3 398 aaPredicted RBP21.71■■□□□ 1.07
HLA-C-208ENST00000487245 MEGF10Q96KG7 1140 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 DOK5Q9P104 306 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 NAT8Q9UHE5 227 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 URGCP-MRPS24S4R325 110 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 TRBV24-1A0A075B6N3 115 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 IGKV1D-17A0A075B6S4 117 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 FAM90A9PA6NNJ1 464 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 TMEM250H0YL14 139 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 CYB5BO43169 146 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 OPN1MWP04001 364 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 OPN1MW2P0DN77 364 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 OPN1MW3P0DN78 364 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 CD81P60033 236 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 MEF2BQ02080 365 aaPredicted RBP21.71■■□□□ 1.07
HLA-C-208ENST00000487245 CYP2G1PQ6ZSU1 146 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 TPRX1Q8N7U7 411 aa21.71■■□□□ 1.07
HLA-C-208ENST00000487245 PRSS33Q8NF86 280 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms