RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 CBX3Q13185 183 aa17.56■□□□□ 0.4
CDHR3-212ENST00000487084 CNIH2Q6PI25 160 aa17.56■□□□□ 0.4
CDHR3-212ENST00000487084 SAMD12Q8N8I0 201 aa17.56■□□□□ 0.4
CDHR3-212ENST00000487084 FLYWCH2Q96CP2 140 aaKnown RBP17.56■□□□□ 0.4
CDHR3-212ENST00000487084 ANXA10Q9UJ72 324 aa17.56■□□□□ 0.4
CDHR3-212ENST00000487084 GAB2Q9UQC2 676 aa17.56■□□□□ 0.4
CDHR3-212ENST00000487084 PLXNB1O43157 2135 aa17.56■□□□□ 0.4
CDHR3-212ENST00000487084 TRAV41A0A0B4J266 112 aa17.55■□□□□ 0.4
CDHR3-212ENST00000487084 FCER2P06734 321 aa17.55■□□□□ 0.4
CDHR3-212ENST00000487084 PTHLHP12272 177 aa17.55■□□□□ 0.4
CDHR3-212ENST00000487084 NDPQ00604 133 aa17.55■□□□□ 0.4
CDHR3-212ENST00000487084 PSG5Q15238 335 aa17.55■□□□□ 0.4
CDHR3-212ENST00000487084 ECSCRQ19T08 205 aa17.55■□□□□ 0.4
CDHR3-212ENST00000487084 UBE2NLQ5JXB2 153 aa17.55■□□□□ 0.4
CDHR3-212ENST00000487084 ZNF695Q8IW36 515 aa17.55■□□□□ 0.4
CDHR3-212ENST00000487084 BEST4Q8NFU0 473 aa17.55■□□□□ 0.4
CDHR3-212ENST00000487084 S100A16Q96FQ6 103 aaKnown RBP17.55■□□□□ 0.4
CDHR3-212ENST00000487084 AUNIPQ9H7T9 357 aa17.55■□□□□ 0.4
CDHR3-212ENST00000487084 A3GALT2U3KPV4 340 aa17.55■□□□□ 0.4
CDHR3-212ENST00000487084 FCN1O00602 326 aa17.54■□□□□ 0.4
CDHR3-212ENST00000487084 IGHG4P01861 327 aa17.54■□□□□ 0.4
CDHR3-212ENST00000487084 IGLL1P15814 213 aa17.54■□□□□ 0.4
CDHR3-212ENST00000487084 THBS3P49746 956 aa17.54■□□□□ 0.4
CDHR3-212ENST00000487084 LUMP51884 338 aaPredicted RBP17.54■□□□□ 0.4
CDHR3-212ENST00000487084 CX3CL1P78423 397 aa17.54■□□□□ 0.4
CDHR3-212ENST00000487084 BEAN1Q3B7T3 259 aa17.54■□□□□ 0.4
CDHR3-212ENST00000487084 PDLIM3Q53GG5 364 aaPredicted RBP17.54■□□□□ 0.4
CDHR3-212ENST00000487084 GVQW1Q8N7I0 195 aa17.54■□□□□ 0.4
CDHR3-212ENST00000487084 SLC25A46Q96AG3 418 aa17.54■□□□□ 0.4
CDHR3-212ENST00000487084 ZNF580Q9UK33 172 aa17.54■□□□□ 0.4
CDHR3-212ENST00000487084 OR2W1Q9Y3N9 320 aa17.54■□□□□ 0.4
CDHR3-212ENST00000487084 SLC25A17O43808 307 aa17.53■□□□□ 0.4
CDHR3-212ENST00000487084 SPDEFO95238 335 aa17.53■□□□□ 0.4
CDHR3-212ENST00000487084 RTL8BQ17RB0 113 aa17.53■□□□□ 0.4
CDHR3-212ENST00000487084 ZNF660Q6AZW8 331 aaPredicted RBP17.53■□□□□ 0.4
CDHR3-212ENST00000487084 ETV3LQ6ZN32 361 aa17.53■□□□□ 0.4
CDHR3-212ENST00000487084 BVESQ8NE79 360 aa17.53■□□□□ 0.4
CDHR3-212ENST00000487084 HARBI1Q96MB7 349 aa17.53■□□□□ 0.4
CDHR3-212ENST00000487084 DUX3Q96PT4 197 aa17.53■□□□□ 0.4
CDHR3-212ENST00000487084 FBXO7Q9Y3I1 522 aa17.53■□□□□ 0.4
CDHR3-212ENST00000487084 MEIS3P1A6NDR6 274 aa17.52■□□□□ 0.4
CDHR3-212ENST00000487084 XRCC3O43542 346 aa17.52■□□□□ 0.4
CDHR3-212ENST00000487084 CA2P00918 260 aa17.52■□□□□ 0.4
CDHR3-212ENST00000487084 SLC6A1P30531 599 aa17.52■□□□□ 0.4
CDHR3-212ENST00000487084 TMEM69Q5SWH9 247 aa17.52■□□□□ 0.4
CDHR3-212ENST00000487084 TMEM65Q6PI78 240 aa17.52■□□□□ 0.4
CDHR3-212ENST00000487084 HOGA1Q86XE5 327 aa17.52■□□□□ 0.4
CDHR3-212ENST00000487084 ZNF645Q8N7E2 425 aa17.52■□□□□ 0.4
CDHR3-212ENST00000487084 WFDC9Q8NEX5 89 aa17.52■□□□□ 0.4
CDHR3-212ENST00000487084 ADTRPQ96IZ2 230 aa17.52■□□□□ 0.4
CDHR3-212ENST00000487084 TPSG1Q9NRR2 321 aa17.52■□□□□ 0.4
CDHR3-212ENST00000487084 SHOXO15266 292 aa17.51■□□□□ 0.39
CDHR3-212ENST00000487084 PSMB8P28062 276 aa17.51■□□□□ 0.39
CDHR3-212ENST00000487084 DUTP33316 252 aaKnown RBP17.51■□□□□ 0.39
CDHR3-212ENST00000487084 TAGLNQ01995 201 aaKnown RBP17.51■□□□□ 0.39
CDHR3-212ENST00000487084 DEFB136Q30KP8 78 aa17.51■□□□□ 0.39
CDHR3-212ENST00000487084 MRPL41Q8IXM3 137 aaKnown RBP17.51■□□□□ 0.39
CDHR3-212ENST00000487084 LINC00482Q8N8I6 264 aa17.51■□□□□ 0.39
CDHR3-212ENST00000487084 RNF152Q8N8N0 203 aa17.51■□□□□ 0.39
CDHR3-212ENST00000487084 KCTD12Q96CX2 325 aaKnown RBP17.51■□□□□ 0.39
CDHR3-212ENST00000487084 FAM103A1Q9BTL3 118 aaKnown RBP17.51■□□□□ 0.39
CDHR3-212ENST00000487084 MRPS26Q9BYN8 205 aaKnown RBP17.51■□□□□ 0.39
CDHR3-212ENST00000487084 NAA50Q9GZZ1 169 aaKnown RBP17.51■□□□□ 0.39
CDHR3-212ENST00000487084 IFT46Q9NQC8 304 aa17.51■□□□□ 0.39
CDHR3-212ENST00000487084 COMMD3Q9UBI1 195 aa17.51■□□□□ 0.39
CDHR3-212ENST00000487084 IGKV1D-13A0A0B4J2D9 117 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 A0A1W2PN81 502 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 LINC00473A8K010 186 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 TUSC2O75896 110 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 HLA-DQB1P01920 261 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 PRB2P02812 416 aaPredicted RBP17.5■□□□□ 0.39
CDHR3-212ENST00000487084 IGKV1-13P0DP09 117 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 RRASP10301 218 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 PPIFP30405 207 aaKnown RBP17.5■□□□□ 0.39
CDHR3-212ENST00000487084 CHRNA7P36544 502 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 CBX5P45973 191 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 LGALS7P47929 136 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 RAB25P57735 213 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 TAS2R20P59543 309 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 GNB1P62873 340 aa17.5■□□□□ 0.39
CDHR3-212ENST00000487084 CRYZL1O95825 349 aa17.49■□□□□ 0.39
CDHR3-212ENST00000487084 IGLV2-23P01705 113 aa17.49■□□□□ 0.39
CDHR3-212ENST00000487084 MYCNOSP40205 109 aa17.49■□□□□ 0.39
CDHR3-212ENST00000487084 CDX1P47902 265 aaPredicted RBP17.49■□□□□ 0.39
CDHR3-212ENST00000487084 KPRPQ5T749 579 aaPredicted RBP17.49■□□□□ 0.39
CDHR3-212ENST00000487084 GPR107Q5VW38 600 aa17.49■□□□□ 0.39
CDHR3-212ENST00000487084 ZNF562Q6V9R5 426 aa17.49■□□□□ 0.39
CDHR3-212ENST00000487084 PPP1R27Q86WC6 154 aa17.49■□□□□ 0.39
CDHR3-212ENST00000487084 ANKRD13BQ86YJ7 626 aa17.49■□□□□ 0.39
CDHR3-212ENST00000487084 GRPEL2Q8TAA5 225 aa17.49■□□□□ 0.39
CDHR3-212ENST00000487084 RCC1LQ96I51 464 aaKnown RBP17.49■□□□□ 0.39
CDHR3-212ENST00000487084 RAX2Q96IS3 184 aa17.49■□□□□ 0.39
CDHR3-212ENST00000487084 KLK15Q9H2R5 256 aa17.49■□□□□ 0.39
CDHR3-212ENST00000487084 NECAP2Q9NVZ3 263 aa17.49■□□□□ 0.39
CDHR3-212ENST00000487084 RBMX2Q9Y388 322 aaKnown RBP17.49■□□□□ 0.39
CDHR3-212ENST00000487084 CCL24O00175 119 aa17.48■□□□□ 0.39
CDHR3-212ENST00000487084 SLC22A5O76082 557 aa17.48■□□□□ 0.39
CDHR3-212ENST00000487084 EIF4EP06730 217 aaKnown RBP17.48■□□□□ 0.39
CDHR3-212ENST00000487084 FCGR2CP31995 323 aa17.48■□□□□ 0.39
CDHR3-212ENST00000487084 TMEM267Q0VDI3 215 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms