RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 NABP2Q9BQ15 211 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 SLC25A21Q9BQT8 299 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-229ENST00000486665 MEGF9Q9H1U4 602 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 DPAGT1Q9H3H5 408 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 FAM96BQ9Y3D0 163 aa10.29□□□□□ -0.76
HDAC6-229ENST00000486665 IGHV3-72A0A0B4J1Y9 119 aa10.28□□□□□ -0.76
HDAC6-229ENST00000486665 IGHV1-3A0A0C4DH29 117 aa10.28□□□□□ -0.76
HDAC6-229ENST00000486665 LINC00473A8K010 186 aa10.28□□□□□ -0.76
HDAC6-229ENST00000486665 OOSP1A8MZH6 123 aa10.28□□□□□ -0.76
HDAC6-229ENST00000486665 TCRBP04435 133 aa10.28□□□□□ -0.76
HDAC6-229ENST00000486665 DUTP33316 252 aaKnown RBP10.28□□□□□ -0.76
HDAC6-229ENST00000486665 ECI1P42126 302 aa10.28□□□□□ -0.76
HDAC6-229ENST00000486665 RAB13P51153 203 aa10.28□□□□□ -0.76
HDAC6-229ENST00000486665 SURF2Q15527 256 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-229ENST00000486665 TUSC1Q2TAM9 212 aa10.28□□□□□ -0.76
HDAC6-229ENST00000486665 MOB3BQ86TA1 216 aa10.28□□□□□ -0.76
HDAC6-229ENST00000486665 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-229ENST00000486665 ZDHHC22Q8N966 263 aa10.28□□□□□ -0.76
HDAC6-229ENST00000486665 TIMM23O14925 209 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 ARPC1BO15143 372 aaKnown RBP10.27□□□□□ -0.77
HDAC6-229ENST00000486665 WIPF1O43516 503 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 CD24P25063 80 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 PIGPP57054 158 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 BRWD1-AS2P59051 145 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 RND3P61587 244 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 RBMS2Q15434 407 aaKnown RBP10.27□□□□□ -0.77
HDAC6-229ENST00000486665 FBLN7Q53RD9 439 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 TMED4Q7Z7H5 227 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 TBC1D26Q86UD7 250 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 OR8H3Q8N146 312 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 DUSP18Q8NEJ0 188 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 ENKURQ8TC29 256 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 PIFOQ8TCI5 191 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 DDB2Q92466 427 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 CFHR4Q92496 578 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 TMEM230Q96A57 120 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 ZNF486Q96H40 463 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-229ENST00000486665 SCGB3A2Q96PL1 93 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 SLC2A9Q9NRM0 540 aa10.27□□□□□ -0.77
HDAC6-229ENST00000486665 C14orf166Q9Y224 244 aaKnown RBP10.27□□□□□ -0.77
HDAC6-229ENST00000486665 TRAV6A0A075B6T7 132 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 H0YJW9 148 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 MPPED1O15442 326 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 RLN1P04808 185 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 FBP1P09467 338 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 THBS3P49746 956 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 ABCA11PQ4W5N1 156 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 CCDC144NLQ6NUI1 221 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 ZNF66Q6ZN08 573 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 CMTM1Q8IZ96 169 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 SIGLECL1Q8N7X8 197 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 OR5AN1Q8NGI8 311 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 ZFAND2BQ8WV99 257 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 TCTEX1D2Q8WW35 142 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 HSD17B10Q99714 261 aaKnown RBP10.26□□□□□ -0.77
HDAC6-229ENST00000486665 PRDM13Q9H4Q3 707 aa10.26□□□□□ -0.77
HDAC6-229ENST00000486665 FAM90A9PA6NNJ1 464 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 TXNL1O43396 289 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 TCF21O43680 179 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 VENTXO95231 258 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 H2AFB2P0C5Z0 115 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 VSIG10L2P0DP72 767 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 AKR1C4P17516 323 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 ANXA7P20073 488 aaKnown RBP10.25□□□□□ -0.77
HDAC6-229ENST00000486665 HABP2Q14520 560 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-229ENST00000486665 OR2B11Q5JQS5 317 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 Q6YL49 198 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 SLC25A42Q86VD7 318 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 OR51H1Q8NH63 302 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 CAPSLQ8WWF8 208 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 ADTRPQ96IZ2 230 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 RITA1Q96K30 269 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 SSX3Q99909 188 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 C20orf85Q9H1P6 137 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 BEX1Q9HBH7 125 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 NUDT15Q9NV35 164 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 COPZ2Q9P299 210 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 NUBP2Q9Y5Y2 271 aa10.25□□□□□ -0.77
HDAC6-229ENST00000486665 PKD1L1Q8TDX9 2849 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 CRYM-AS1A6NIL9 109 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 VGLL3A8MV65 326 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 FCGR3BO75015 233 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 PTTG1O95997 202 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 IGHV4-59P01825 116 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 SNRNP70P08621 437 aaKnown RBP10.24□□□□□ -0.77
HDAC6-229ENST00000486665 F2RP25116 425 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 CD1BP29016 333 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 DYNLT3P51808 116 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 RAB25P57735 213 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 SUPT4H1P63272 117 aaKnown RBP10.24□□□□□ -0.77
HDAC6-229ENST00000486665 DHODHQ02127 395 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 RGS21Q2M5E4 152 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 LRRC75BQ2VPJ9 315 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 SP6Q3SY56 376 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 CCBE1Q6UXH8 406 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-229ENST00000486665 KCTD9Q7L273 389 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 CENPSQ8N2Z9 138 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 CCDC71LQ8N9Z2 235 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 NAA60Q9H7X0 242 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms