RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 ZNF660Q6AZW8 331 aaPredicted RBP14.32□□□□□ -0.12
CLDN11-206ENST00000486429 TMEM65Q6PI78 240 aa14.32□□□□□ -0.12
CLDN11-206ENST00000486429 H1FOOQ8IZA3 346 aaPredicted RBP14.32□□□□□ -0.12
CLDN11-206ENST00000486429 OR5H6Q8NGV6 325 aa14.32□□□□□ -0.12
CLDN11-206ENST00000486429 ABHD5Q8WTS1 349 aa14.32□□□□□ -0.12
CLDN11-206ENST00000486429 RAX2Q96IS3 184 aa14.32□□□□□ -0.12
CLDN11-206ENST00000486429 DUX3Q96PT4 197 aa14.32□□□□□ -0.12
CLDN11-206ENST00000486429 ST6GALNAC5Q9BVH7 336 aa14.32□□□□□ -0.12
CLDN11-206ENST00000486429 DCSTAMPQ9H295 470 aa14.32□□□□□ -0.12
CLDN11-206ENST00000486429 SDHAF2Q9NX18 166 aa14.32□□□□□ -0.12
CLDN11-206ENST00000486429 GAB2Q9UQC2 676 aa14.32□□□□□ -0.12
CLDN11-206ENST00000486429 DNAH3Q8TD57 4116 aa14.31□□□□□ -0.12
CLDN11-206ENST00000486429 CCL24O00175 119 aa14.31□□□□□ -0.12
CLDN11-206ENST00000486429 RAB25P57735 213 aa14.31□□□□□ -0.12
CLDN11-206ENST00000486429 RPS16P62249 146 aaKnown RBP14.31□□□□□ -0.12
CLDN11-206ENST00000486429 CX3CL1P78423 397 aa14.31□□□□□ -0.12
CLDN11-206ENST00000486429 CBX3Q13185 183 aa14.31□□□□□ -0.12
CLDN11-206ENST00000486429 DEFB136Q30KP8 78 aa14.31□□□□□ -0.12
CLDN11-206ENST00000486429 ZNF260Q3ZCT1 412 aa14.31□□□□□ -0.12
CLDN11-206ENST00000486429 C4orf3Q8WVX3 66 aa14.31□□□□□ -0.12
CLDN11-206ENST00000486429 DPF1Q92782 380 aa14.31□□□□□ -0.12
CLDN11-206ENST00000486429 FLYWCH2Q96CP2 140 aaKnown RBP14.31□□□□□ -0.12
CLDN11-206ENST00000486429 SLC25A38Q96DW6 304 aa14.31□□□□□ -0.12
CLDN11-206ENST00000486429 MCRIP2Q9BUT9 160 aaKnown RBP14.31□□□□□ -0.12
CLDN11-206ENST00000486429 AURKAIP1Q9NWT8 199 aaPredicted RBP14.31□□□□□ -0.12
CLDN11-206ENST00000486429 AIREO43918 545 aa14.3□□□□□ -0.12
CLDN11-206ENST00000486429 IGLV1-40P01703 118 aa14.3□□□□□ -0.12
CLDN11-206ENST00000486429 CTXN2P0C2S0 81 aa14.3□□□□□ -0.12
CLDN11-206ENST00000486429 CRIP2P52943 208 aaPredicted RBP14.3□□□□□ -0.12
CLDN11-206ENST00000486429 TCTEX1D1Q8N7M0 179 aa14.3□□□□□ -0.12
CLDN11-206ENST00000486429 MYOZ3Q8TDC0 251 aa14.3□□□□□ -0.12
CLDN11-206ENST00000486429 C5orf30Q96GV9 206 aa14.3□□□□□ -0.12
CLDN11-206ENST00000486429 FBXO7Q9Y3I1 522 aa14.3□□□□□ -0.12
CLDN11-206ENST00000486429 A3GALT2U3KPV4 340 aa14.3□□□□□ -0.12
CLDN11-206ENST00000486429 A0A0A6YYH2 397 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 A0A1W2PN81 502 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 A6NJ64 397 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 SLC25A17O43808 307 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 SSX5O60225 188 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 TMEM127O75204 238 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 CA2P00918 260 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 CHRNA7P36544 502 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 TAGLNQ01995 201 aaKnown RBP14.29□□□□□ -0.12
CLDN11-206ENST00000486429 RTL8BQ17RB0 113 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 CROCCP3Q8IVE0 287 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 MINDY2Q8NBR6 621 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 MRAPQ8TCY5 172 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 YIPF6Q96EC8 236 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 HARBI1Q96MB7 349 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 CLCC1Q96S66 551 aa14.29□□□□□ -0.12
CLDN11-206ENST00000486429 FOXA2Q9Y261 457 aaPredicted RBP14.29□□□□□ -0.12
CLDN11-206ENST00000486429 TRAV18A0A075B6X5 111 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 FCN1O00602 326 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 TGFBR1P36897 503 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 C19orf54Q5BKX5 351 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 CNIH2Q6PI25 160 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 ARPC1AQ92747 370 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 ADTRPQ96IZ2 230 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 UBE2E2Q96LR5 201 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 KLK15Q9H2R5 256 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 TPSG1Q9NRR2 321 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 SPATA2Q9UM82 520 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 VSIG4Q9Y279 399 aa14.28□□□□□ -0.12
CLDN11-206ENST00000486429 RRASP10301 218 aa14.27□□□□□ -0.13
CLDN11-206ENST00000486429 LGALS7P47929 136 aa14.27□□□□□ -0.13
CLDN11-206ENST00000486429 LUMP51884 338 aaPredicted RBP14.27□□□□□ -0.13
CLDN11-206ENST00000486429 LSM3P62310 102 aaKnown RBP14.27□□□□□ -0.13
CLDN11-206ENST00000486429 TMEM267Q0VDI3 215 aaPredicted RBP14.27□□□□□ -0.13
CLDN11-206ENST00000486429 ZNF562Q6V9R5 426 aa14.27□□□□□ -0.13
CLDN11-206ENST00000486429 PPP1R27Q86WC6 154 aa14.27□□□□□ -0.13
CLDN11-206ENST00000486429 ZNF491Q8N8L2 437 aa14.27□□□□□ -0.13
CLDN11-206ENST00000486429 BVESQ8NE79 360 aa14.27□□□□□ -0.13
CLDN11-206ENST00000486429 OR5M8Q8NGP6 311 aa14.27□□□□□ -0.13
CLDN11-206ENST00000486429 FAM103A1Q9BTL3 118 aaKnown RBP14.27□□□□□ -0.13
CLDN11-206ENST00000486429 DIABLOQ9NR28 239 aa14.27□□□□□ -0.13
CLDN11-206ENST00000486429 ANXA10Q9UJ72 324 aa14.27□□□□□ -0.13
CLDN11-206ENST00000486429 OR2W1Q9Y3N9 320 aa14.27□□□□□ -0.13
CLDN11-206ENST00000486429 J3QRK9 145 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 SHOXO15266 292 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 SOX15O60248 233 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 NFYAP23511 347 aaPredicted RBP14.26□□□□□ -0.13
CLDN11-206ENST00000486429 HOXD3P31249 432 aaPredicted RBP14.26□□□□□ -0.13
CLDN11-206ENST00000486429 DUTP33316 252 aaKnown RBP14.26□□□□□ -0.13
CLDN11-206ENST00000486429 RAB9AP51151 201 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 ARPC4P59998 168 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 FHL3Q13643 280 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 TMEM177Q53S58 311 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 PYHIN1Q6K0P9 492 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 UNQ5815/PRO19632Q6UWF5 114 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 ZNF645Q8N7E2 425 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 GRPEL2Q8TAA5 225 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 GNB4Q9HAV0 340 aa14.26□□□□□ -0.13
CLDN11-206ENST00000486429 IGLV2-23P01705 113 aa14.25□□□□□ -0.13
CLDN11-206ENST00000486429 EGR2P11161 476 aaPredicted RBP14.25□□□□□ -0.13
CLDN11-206ENST00000486429 GNB1P62873 340 aa14.25□□□□□ -0.13
CLDN11-206ENST00000486429 EGFEM1PQ0D2K5 195 aa14.25□□□□□ -0.13
CLDN11-206ENST00000486429 ACTBL2Q562R1 376 aa14.25□□□□□ -0.13
CLDN11-206ENST00000486429 LFNGQ8NES3 379 aa14.25□□□□□ -0.13
CLDN11-206ENST00000486429 BEST4Q8NFU0 473 aa14.25□□□□□ -0.13
CLDN11-206ENST00000486429 DDB2Q92466 427 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms