RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 DCSTAMPQ9H295 470 aa12.99□□□□□ -0.33
CCHCR1-214ENST00000486060 KIAA1456Q9P272 454 aa12.99□□□□□ -0.33
CCHCR1-214ENST00000486060 SPATA2Q9UM82 520 aa12.99□□□□□ -0.33
CCHCR1-214ENST00000486060 TRAV18A0A075B6X5 111 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 NUDT19A8MXV4 375 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 SOX15O60248 233 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 RBBP9O75884 186 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 SCGNO76038 276 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 IGLV1-40P01703 118 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 IGLV2-23P01705 113 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 CXorf66Q5JRM2 361 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 FOXB2Q5VYV0 432 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 PDPNQ86YL7 162 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 GVQW1Q8N7I0 195 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 DDB2Q92466 427 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 RNF5Q99942 180 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 GINS4Q9BRT9 223 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 GON7Q9BXV9 100 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 SLC35D1Q9NTN3 355 aa12.98□□□□□ -0.33
CCHCR1-214ENST00000486060 TRAV41A0A0B4J266 112 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 IGKV1D-13A0A0B4J2D9 117 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 LINC00473A8K010 186 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 J3QRK9 145 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 IGLV2-14P01704 120 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 IGKV1-13P0DP09 117 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 NFYAP23511 347 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 CDX1P47902 265 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 GNG2P59768 71 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 PITPNAQ00169 270 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 MRGPRG-AS1Q2M3A8 158 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 TIMM50Q3ZCQ8 353 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 ZNF660Q6AZW8 331 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 MINDY2Q8NBR6 621 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 CLCC1Q96S66 551 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 FUNDC2Q9BWH2 189 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 METTL1Q9UBP6 276 aaKnown RBP12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 NUBP2Q9Y5Y2 271 aa12.97□□□□□ -0.33
CCHCR1-214ENST00000486060 SRRM4A7MD48 611 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 ARPC1BO15143 372 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 CRYGBP07316 175 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 SLC6A1P30531 599 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 DUTP33316 252 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 MYCNOSP40205 109 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 NCS1P62166 190 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 RPS16P62249 146 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 CNIH2Q6PI25 160 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 BVESQ8NE79 360 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 OR13F1Q8NGS4 319 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 CASTOR1Q8WTX7 329 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 FAM103A1Q9BTL3 118 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 AUNIPQ9H7T9 357 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 GNB4Q9HAV0 340 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 VCX3AQ9NNX9 186 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 ANXA10Q9UJ72 324 aa12.96□□□□□ -0.33
CCHCR1-214ENST00000486060 CCL24O00175 119 aa12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 SLC25A17O43808 307 aa12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 TUSC2O75896 110 aa12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 CA2P00918 260 aa12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 HLA-DQB1P01920 261 aa12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 APOA2P02652 100 aa12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 OR5H8P0DN80 308 aa12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 PJVKQ0ZLH3 352 aa12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 ECSCRQ19T08 205 aa12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 ZNF491Q8N8L2 437 aa12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 FLYWCH2Q96CP2 140 aaKnown RBP12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 RCC1LQ96I51 464 aaKnown RBP12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 NAA50Q9GZZ1 169 aaKnown RBP12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 AURKAIP1Q9NWT8 199 aaPredicted RBP12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 OR2W1Q9Y3N9 320 aa12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 RBM7Q9Y580 266 aaKnown RBP12.95□□□□□ -0.34
CCHCR1-214ENST00000486060 A0A0A6YYH2 397 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 A6NJ64 397 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 TMEM127O75204 238 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 SPDEFO95238 335 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 FCER2P06734 321 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 KRTAP10-11P60412 298 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 VBP1P61758 197 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 RPL30P62888 115 aaKnown RBP12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 EIF4EBP1Q13541 118 aaPredicted RBP12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 PLGLAQ15195 96 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 TMEM177Q53S58 311 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 ASPHD1Q5U4P2 390 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 ZNF562Q6V9R5 426 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 HOGA1Q86XE5 327 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 SNAPC3Q92966 411 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 TSNAXQ99598 290 aaKnown RBP12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 A3GALT2U3KPV4 340 aa12.94□□□□□ -0.34
CCHCR1-214ENST00000486060 A0A1W2PN81 502 aa12.93□□□□□ -0.34
CCHCR1-214ENST00000486060 I3L521 148 aa12.93□□□□□ -0.34
CCHCR1-214ENST00000486060 CTXN2P0C2S0 81 aa12.93□□□□□ -0.34
CCHCR1-214ENST00000486060 CHRNA7P36544 502 aa12.93□□□□□ -0.34
CCHCR1-214ENST00000486060 RAB9AP51151 201 aa12.93□□□□□ -0.34
CCHCR1-214ENST00000486060 FHL3Q13643 280 aa12.93□□□□□ -0.34
CCHCR1-214ENST00000486060 PPP1R27Q86WC6 154 aa12.93□□□□□ -0.34
CCHCR1-214ENST00000486060 ZNF645Q8N7E2 425 aa12.93□□□□□ -0.34
CCHCR1-214ENST00000486060 BEST4Q8NFU0 473 aa12.93□□□□□ -0.34
CCHCR1-214ENST00000486060 C4orf3Q8WVX3 66 aa12.93□□□□□ -0.34
CCHCR1-214ENST00000486060 SLC25A46Q96AG3 418 aa12.93□□□□□ -0.34
CCHCR1-214ENST00000486060 HARBI1Q96MB7 349 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms