RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 RYR3Q15413 4870 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 ADGRG4Q8IZF6 3080 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 ABCA2Q9BZC7 2435 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 TRAV8-4A0A0B4J246 113 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 A0A0U1RQV1 116 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 PRORSD1PA6NEY8 169 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 H7C1H1 209 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 KPNA4O00629 521 aaPredicted RBP1.94□□□□□ -2.1
VPS41-213ENST00000485955 BHLHE40O14503 412 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 BET1O15155 118 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 CST8O60676 142 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 CCNKO75909 580 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 AIFM1O95831 613 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 PTHP01270 115 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 P01737 135 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 SERPINA7P05543 415 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 FAM228BP0C875 321 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 C1GALT1C1LP0DN25 315 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 CD37P11049 281 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 CCL5P13501 91 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 CD99P14209 185 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 ZNF14P17017 642 aaPredicted RBP1.94□□□□□ -2.1
VPS41-213ENST00000485955 HIST1H1TP22492 207 aaPredicted RBP1.94□□□□□ -2.1
VPS41-213ENST00000485955 MYL9P24844 172 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 PAX6P26367 422 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 S100GP29377 79 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 TSPOP30536 169 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 PFN2P35080 140 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 SERPINB5P36952 375 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 MYCNOSP40205 109 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 CXCL5P42830 114 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 PPICP45877 212 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 TCTAP57738 103 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 TAS2R43P59537 309 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 CDC42P60953 191 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 RAB2AP61019 212 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 RAB5BP61020 215 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 MXD1Q05195 221 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 ZNF266Q14584 549 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 GINS1Q14691 196 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 PRSS8Q16651 343 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 KRTAP13-2Q52LG2 175 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 LAMTOR1Q6IAA8 161 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 OR10K2Q6IF99 312 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 SMARCD3Q6STE5 483 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 ZNF571Q7Z3V5 609 aaPredicted RBP1.94□□□□□ -2.1
VPS41-213ENST00000485955 GLT6D1Q7Z4J2 308 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 CAMK2N1Q7Z7J9 78 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 PCP2Q8IVA1 136 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 TMEM86BQ8N661 226 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 NPWQ8N729 165 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 OR13G1Q8NGZ3 307 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 OR1P1Q8NH06 330 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 NT5CQ8TCD5 201 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 SPPL2BQ8TCT7 592 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 ZFP90Q8TF47 636 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 BLNKQ8WV28 456 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 TNFAIP8L1Q8WVP5 186 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 C11orf40Q8WZ69 217 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 TAMM41Q96BW9 452 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 BTN2A3PQ96KV6 586 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 OLFM3Q96PB7 478 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 PFDN5Q99471 154 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 PITX2Q99697 317 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 GINS3Q9BRX5 216 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 EMC6Q9BV81 110 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 KIFC1Q9BW19 673 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 DCSTAMPQ9H295 470 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 ENY2Q9NPA8 101 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 TAS2R1Q9NYW7 299 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 DOK5Q9P104 306 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 OPTCQ9UBM4 332 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 CARHSP1Q9Y2V2 147 aaKnown RBP1.94□□□□□ -2.1
VPS41-213ENST00000485955 PRELID3BQ9Y3B1 194 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 UFC1Q9Y3C8 167 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 FAM32AQ9Y421 112 aaKnown RBP1.94□□□□□ -2.1
VPS41-213ENST00000485955 HSPB11Q9Y547 144 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 YTHDF2Q9Y5A9 579 aaKnown RBP1.94□□□□□ -2.1
VPS41-213ENST00000485955 F8P00451 2351 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 MYO7AQ13402 2215 aa1.94□□□□□ -2.1
VPS41-213ENST00000485955 COL5A1P20908 1838 aaPredicted RBP1.94□□□□□ -2.1
VPS41-213ENST00000485955 NRCAMQ92823 1304 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 FLNCQ14315 2725 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 IGLV2-18A0A075B6J9 118 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 IGKV1D-13A0A0B4J2D9 117 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 EXOC1LA0A1B0GW35 172 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 PQLC2LA1A4F0 135 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 EVPLLA8MZ36 301 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 D6RAR5 112 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 F8W036 122 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 J3QT63 122 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 AGPAT2O15120 278 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 STK16O75716 305 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 OR7C1O76099 320 aaPredicted RBP1.93□□□□□ -2.1
VPS41-213ENST00000485955 GPR75O95800 540 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 CYB5R3P00387 301 aaPredicted RBP1.93□□□□□ -2.1
VPS41-213ENST00000485955 MT-CO2P00403 227 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 IGLV2-23P01705 113 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 EIF4EP06730 217 aaKnown RBP1.93□□□□□ -2.1
VPS41-213ENST00000485955 CRYGDP07320 174 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms