RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 MS4A7Q9GZW8 240 aaPredicted RBP12.73□□□□□ -0.37
APOE-205ENST00000485628 FAM212BQ9NTI7 297 aaPredicted RBP12.73□□□□□ -0.37
APOE-205ENST00000485628 FLVCR2Q9UPI3 526 aa12.73□□□□□ -0.37
APOE-205ENST00000485628 INAFM1C9JVW0 142 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 FBP1P09467 338 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 PGAM2P15259 253 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 SPNP16150 400 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 HNF1AP20823 631 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 F2RP25116 425 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 REG1BP48304 166 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 THBS3P49746 956 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 RAG2P55895 527 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 PIGPP57054 158 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 SUPT4H1P63272 117 aaKnown RBP12.72□□□□□ -0.37
APOE-205ENST00000485628 TAGLNQ01995 201 aaKnown RBP12.72□□□□□ -0.37
APOE-205ENST00000485628 Q6YL49 198 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 KCTD9Q7L273 389 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 CMTM1Q8IZ96 169 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 DRAXINQ8NBI3 349 aaPredicted RBP12.72□□□□□ -0.37
APOE-205ENST00000485628 GALNT14Q96FL9 552 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 NUBP2Q9Y5Y2 271 aa12.72□□□□□ -0.37
APOE-205ENST00000485628 TEP1Q99973 2627 aaKnown RBP12.71□□□□□ -0.37
APOE-205ENST00000485628 CRYM-AS1A6NIL9 109 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 TIMM23O14925 209 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 RBFOX2O43251 390 aaKnown RBP eCLIP12.71□□□□□ -0.37
APOE-205ENST00000485628 CRLF1O75462 422 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 UBE2MP61081 183 aaKnown RBP12.71□□□□□ -0.37
APOE-205ENST00000485628 OXA1LQ15070 435 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 ZNF585BQ52M93 769 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 PHLDA2Q53GA4 152 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 FBLN7Q53RD9 439 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 TMEM128Q5BJH2 165 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 Q71RC1 249 aaPredicted RBP12.71□□□□□ -0.37
APOE-205ENST00000485628 TBC1D26Q86UD7 250 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 Q8N6K4 173 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 TCTEX1D1Q8N7M0 179 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 C20orf85Q9H1P6 137 aa12.71□□□□□ -0.37
APOE-205ENST00000485628 MDFIC2A0A1B0GVS7 189 aa12.7□□□□□ -0.38
APOE-205ENST00000485628 TNFSF12O43508 249 aa12.7□□□□□ -0.38
APOE-205ENST00000485628 VENTXO95231 258 aa12.7□□□□□ -0.38
APOE-205ENST00000485628 VSIG10L2P0DP72 767 aa12.7□□□□□ -0.38
APOE-205ENST00000485628 MC5RP33032 325 aa12.7□□□□□ -0.38
APOE-205ENST00000485628 IER3P46695 156 aa12.7□□□□□ -0.38
APOE-205ENST00000485628 GLDNQ6ZMI3 551 aaPredicted RBP12.7□□□□□ -0.38
APOE-205ENST00000485628 BEX2Q9BXY8 128 aa12.7□□□□□ -0.38
APOE-205ENST00000485628 NUDT15Q9NV35 164 aa12.7□□□□□ -0.38
APOE-205ENST00000485628 C14orf166Q9Y224 244 aaKnown RBP12.7□□□□□ -0.38
APOE-205ENST00000485628 ARPC1BO15143 372 aaKnown RBP12.69□□□□□ -0.38
APOE-205ENST00000485628 B3GALNT1O75752 331 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 IGKV1-16P04430 117 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 SRP14P37108 136 aaKnown RBP12.69□□□□□ -0.38
APOE-205ENST00000485628 RGS21Q2M5E4 152 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 CCBE1Q6UXH8 406 aaPredicted RBP12.69□□□□□ -0.38
APOE-205ENST00000485628 PDPNQ86YL7 162 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 CENPSQ8N2Z9 138 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 CCDC71LQ8N9Z2 235 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 ENKURQ8TC29 256 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 GLYATL2Q8WU03 294 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 CHPT1Q8WUD6 406 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 C22orf15Q8WYQ4 148 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 RBMXL1Q96E39 390 aaKnown RBP12.69□□□□□ -0.38
APOE-205ENST00000485628 TP53RKQ96S44 253 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 RNF5Q99942 180 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 FAM96BQ9Y3D0 163 aa12.69□□□□□ -0.38
APOE-205ENST00000485628 RNF212BA8MTL3 300 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 H0Y980 276 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 RLN1P04808 185 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 H2AFB2P0C5Z0 115 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 FAM157CP0CG43 387 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 RRASP10301 218 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 SRD5A1P18405 259 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 UCP1P25874 307 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 RAB13P51153 203 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 LRRC75BQ2VPJ9 315 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 ABCA11PQ4W5N1 156 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 TMEM177Q53S58 311 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 MOB3BQ86TA1 216 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 CADM3Q8N126 398 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 CAPSLQ8WWF8 208 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 RITA1Q96K30 269 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 SSX3Q99909 188 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 NAA60Q9H7X0 242 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 PLSCR3Q9NRY6 295 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 WASHC3Q9Y3C0 194 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 CUBNO60494 3623 aa12.68□□□□□ -0.38
APOE-205ENST00000485628 IGHV3-72A0A0B4J1Y9 119 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 C3orf85A0A1B0GTC6 90 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 A6NDX4 124 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 RAMP3O60896 148 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 PEX14O75381 377 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 IGKV1-39P01597 117 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 IGKV1D-39P04432 117 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 IL5P05113 134 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 IL6RP08887 468 aaPredicted RBP12.67□□□□□ -0.38
APOE-205ENST00000485628 ANXA7P20073 488 aaKnown RBP12.67□□□□□ -0.38
APOE-205ENST00000485628 S100GP29377 79 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 BRS3P32247 399 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 KIR2DS2P43631 304 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 TAS2R31P59538 309 aa12.67□□□□□ -0.38
APOE-205ENST00000485628 CATR1Q13166 79 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms