RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 EWSR1Q01844 656 aaKnown RBP eCLIP13.75□□□□□ -0.21
CTSA-207ENST00000484855 HEPN1Q6WQI6 88 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 DTX2Q86UW9 622 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 COMMD7Q86VX2 200 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 PDZD9Q8IXQ8 264 aa13.75□□□□□ -0.21
CTSA-207ENST00000484855 CFAP46Q8IYW2 2715 aa13.74□□□□□ -0.21
CTSA-207ENST00000484855 A0A1W2PPR1 153 aa13.74□□□□□ -0.21
CTSA-207ENST00000484855 LEUTXA8MZ59 168 aa13.74□□□□□ -0.21
CTSA-207ENST00000484855 FCGR3BO75015 233 aa13.74□□□□□ -0.21
CTSA-207ENST00000484855 GAPDHP04406 335 aaKnown RBP13.74□□□□□ -0.21
CTSA-207ENST00000484855 NHLH2Q02577 135 aa13.74□□□□□ -0.21
CTSA-207ENST00000484855 CXorf58Q96LI9 332 aa13.74□□□□□ -0.21
CTSA-207ENST00000484855 FAM210AQ96ND0 272 aa13.74□□□□□ -0.21
CTSA-207ENST00000484855 SLC25A31Q9H0C2 315 aa13.74□□□□□ -0.21
CTSA-207ENST00000484855 COA4Q9NYJ1 87 aa13.74□□□□□ -0.21
CTSA-207ENST00000484855 PRELID3BQ9Y3B1 194 aa13.74□□□□□ -0.21
CTSA-207ENST00000484855 CACNA1BQ00975 2339 aa13.74□□□□□ -0.21
CTSA-207ENST00000484855 IGSF23A1L1A6 192 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 JTBO76095 146 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 LY6HO94772 140 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 P0C879 139 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 ERVFRD-1P60508 538 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 MRPS11P82912 194 aaKnown RBP13.73□□□□□ -0.21
CTSA-207ENST00000484855 AVPI1Q5T686 147 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 SLC25A48Q6ZT89 311 aaKnown RBP13.73□□□□□ -0.21
CTSA-207ENST00000484855 ODF3L1Q8IXM7 274 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 NEU4Q8WWR8 484 aaPredicted RBP13.73□□□□□ -0.21
CTSA-207ENST00000484855 TMEM50AO95807 157 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 KIR2DS2P43631 304 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 C1orf229Q6ZS94 237 aaPredicted RBP13.73□□□□□ -0.21
CTSA-207ENST00000484855 TMED6Q8WW62 240 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 RAB40CQ96S21 281 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 S1PR3Q99500 378 aa13.73□□□□□ -0.21
CTSA-207ENST00000484855 ANKRD34BA5PLL1 514 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 TOR1AO14656 332 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 SYNGR2O43760 224 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 HPRT1P00492 218 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 RRASP10301 218 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 IGFBP2P18065 325 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 H2BFWTQ7Z2G1 175 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 TMEM252Q8N6L7 170 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 R3HDM4Q96D70 268 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 RAB39BQ96DA2 213 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 ZNF251Q9BRH9 671 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 UBTD1Q9HAC8 227 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 DCHS2Q6V1P9 2916 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 TRBV23-1A0A0A0MS06 115 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 MARCH11A6NNE9 402 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 FAM90A26D6RGX4 464 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 RBFOX2O43251 390 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTSA-207ENST00000484855 PAX9P55771 341 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 RPL23AP62750 156 aaKnown RBP13.72□□□□□ -0.21
CTSA-207ENST00000484855 TMEM155Q4W5P6 130 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 MIDNQ504T8 468 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 WFDC1Q9HC57 220 aa13.72□□□□□ -0.21
CTSA-207ENST00000484855 BORCS7-ASMTA0A0B4J1R7 106 aa13.71□□□□□ -0.21
CTSA-207ENST00000484855 IAPPP10997 89 aa13.71□□□□□ -0.21
CTSA-207ENST00000484855 THBS3P49746 956 aa13.71□□□□□ -0.21
CTSA-207ENST00000484855 UBAC2Q8NBM4 344 aa13.71□□□□□ -0.21
CTSA-207ENST00000484855 DDB2Q92466 427 aa13.71□□□□□ -0.21
CTSA-207ENST00000484855 TIMD4Q96H15 378 aa13.71□□□□□ -0.21
CTSA-207ENST00000484855 PFDN2Q9UHV9 154 aa13.71□□□□□ -0.21
CTSA-207ENST00000484855 RALYQ9UKM9 306 aaKnown RBP13.71□□□□□ -0.21
CTSA-207ENST00000484855 BAXQ07812 192 aa13.71□□□□□ -0.22
CTSA-207ENST00000484855 EIF5AL1Q6IS14 154 aaKnown RBP13.71□□□□□ -0.22
CTSA-207ENST00000484855 ZNF295-AS1Q8N0V1 137 aa13.71□□□□□ -0.22
CTSA-207ENST00000484855 OR4S2Q8NH73 311 aa13.71□□□□□ -0.22
CTSA-207ENST00000484855 ADTRPQ96IZ2 230 aa13.71□□□□□ -0.22
CTSA-207ENST00000484855 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.71□□□□□ -0.22
CTSA-207ENST00000484855 ZNRD1Q9P1U0 126 aa13.71□□□□□ -0.22
CTSA-207ENST00000484855 WSB1Q9Y6I7 421 aa13.71□□□□□ -0.22
CTSA-207ENST00000484855 H3BP45 60 aa13.7□□□□□ -0.22
CTSA-207ENST00000484855 PPIHO43447 177 aaKnown RBP13.7□□□□□ -0.22
CTSA-207ENST00000484855 DLX6P56179 175 aa13.7□□□□□ -0.22
CTSA-207ENST00000484855 ZNF841Q6ZN19 808 aa13.7□□□□□ -0.22
CTSA-207ENST00000484855 RAB1CQ92928 201 aa13.7□□□□□ -0.22
CTSA-207ENST00000484855 MED9Q9NWA0 146 aa13.7□□□□□ -0.22
CTSA-207ENST00000484855 A6NNC1 897 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 CST7O76096 145 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 UBE2KP61086 200 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 ERVK-16P61578 105 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 TNFRSF9Q07011 255 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 STX12Q86Y82 276 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 OR8B3Q8NGG8 313 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 LRRC20Q8TCA0 184 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 OR8B2Q96RD0 313 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 HSPB7Q9UBY9 170 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 TXNL1O43396 289 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 RBMXL2O75526 392 aaKnown RBP13.69□□□□□ -0.22
CTSA-207ENST00000484855 MED6O75586 246 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 CLINT1Q14677 625 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 ZNF383Q8NA42 475 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 RNF141Q8WVD5 230 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 PSENENQ9NZ42 101 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 MIOXQ9UGB7 285 aa13.69□□□□□ -0.22
CTSA-207ENST00000484855 GPR37O15354 613 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 FBXO24O75426 580 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 PRB1P04280 392 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 NQO2P16083 231 aa13.68□□□□□ -0.22
CTSA-207ENST00000484855 CDKN1AP38936 164 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms