RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 CBLN4Q9NTU7 201 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 CALYQ9NYX4 217 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 PRR13Q9NZ81 148 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 GNG12Q9UBI6 72 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 MMP24Q9Y5R2 645 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 AUP1Q9Y679 476 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 POMT1Q9Y6A1 747 aa4.47□□□□□ -1.69
COL17A1-206ENST00000483876 ANK3Q12955 4377 aaKnown RBP4.47□□□□□ -1.69
COL17A1-206ENST00000483876 WNK1Q9H4A3 2382 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 IGHV3OR15-7A0A075B7D8 119 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 TRBV23-1A0A0A0MS06 115 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 A0A1B0GW55 424 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 FAM90A9PA6NNJ1 464 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 F5H0A9 414 aaPredicted RBP4.46□□□□□ -1.7
COL17A1-206ENST00000483876 RAB29O14966 203 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 TMPRSS2O15393 492 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 SIAH2O43255 324 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 JTBO76095 146 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 CFDP00746 253 aaPredicted RBP4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DANCRP0C864 163 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DUX4L2P0CJ85 424 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DUX4L3P0CJ86 424 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DUX4L4P0CJ87 422 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DUX4L5P0CJ88 424 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DUX4L6P0CJ89 424 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DUX4L7P0CJ90 424 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 TPT1P13693 172 aaKnown RBP4.46□□□□□ -1.7
COL17A1-206ENST00000483876 RPL12P30050 165 aaKnown RBP4.46□□□□□ -1.7
COL17A1-206ENST00000483876 CD80P33681 288 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 SSTR5P35346 364 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 HTR2BP41595 481 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 KIR2DS2P43631 304 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 NKX2-1P43699 371 aaPredicted RBP4.46□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF134P52741 427 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 EDDM3BP56851 147 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 TMEM33P57088 247 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 TAGLNQ01995 201 aaKnown RBP4.46□□□□□ -1.7
COL17A1-206ENST00000483876 EDDM3AQ14507 147 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 LRRC37A5PQ49AS3 106 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 AARDQ4LEZ3 155 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 LRRC10Q5BKY1 277 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 HEPN1Q6WQI6 88 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DTX2Q86UW9 622 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 BAP18Q8IXM2 172 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 OR8H3Q8N146 312 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 FGFRL1Q8N441 504 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 PRR18Q8N4B5 295 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DEFB108BQ8NET1 73 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DMBX1Q8NFW5 382 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 OR51H1Q8NH63 302 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 RFESDQ8TAC1 157 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF596Q8TC21 504 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 ST8SIA2Q92186 375 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 GPR146Q96CH1 333 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 RRNAD1Q96FB5 475 aaKnown RBP4.46□□□□□ -1.7
COL17A1-206ENST00000483876 ADTRPQ96IZ2 230 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 RAB40CQ96S21 281 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 C11orf1Q9H5F2 150 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 CYTL1Q9NRR1 136 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 SDHAF2Q9NX18 166 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 GFOD1Q9NXC2 390 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 IDI2-AS1Q9NZ38 188 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 OR5AC2Q9NZP5 309 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DUX4Q9UBX2 424 aa4.46□□□□□ -1.7
COL17A1-206ENST00000483876 SLC25A10Q9UBX3 287 aaPredicted RBP4.46□□□□□ -1.7
COL17A1-206ENST00000483876 RPUSD1Q9UJJ7 312 aaKnown RBP4.46□□□□□ -1.7
COL17A1-206ENST00000483876 DYSFO75923 2080 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 A0A087X0M5 115 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 A0A1B0GX30 115 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 A0A1W2PPH5 198 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 RPS10-NUDT3A0A1W2PQS6 291 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 NUDT19A8MXV4 375 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 TOR1AO14656 332 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 ADAM20O43506 726 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 TNFSF12O43508 249 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 GPR137BO60478 399 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 PROP1O75360 226 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 MED6O75586 246 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 HPRT1P00492 218 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 PLAUP00749 431 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 IGKV1-39P01597 117 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 GYPAP02724 150 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 RBP4P02753 201 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 IGKV1D-39P04432 117 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 P0C879 139 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 DAOP14920 347 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 DUTP33316 252 aaKnown RBP4.45□□□□□ -1.7
COL17A1-206ENST00000483876 PPP1CCP36873 323 aaKnown RBP4.45□□□□□ -1.7
COL17A1-206ENST00000483876 LPAR6P43657 344 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 GPR12P47775 334 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 BRWD1-AS2P59051 145 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 S100A10P60903 97 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 RPL31P62899 125 aaKnown RBP4.45□□□□□ -1.7
COL17A1-206ENST00000483876 HOXA4Q00056 320 aaPredicted RBP4.45□□□□□ -1.7
COL17A1-206ENST00000483876 BAXQ07812 192 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 TMEM155Q4W5P6 130 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 CT45A1Q5HYN5 189 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 PRR31Q5SQ13 230 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 FAM201AQ5SY85 155 aa4.45□□□□□ -1.7
COL17A1-206ENST00000483876 TMEM200BQ69YZ2 307 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms