RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 UBTD1Q9HAC8 227 aa11.52□□□□□ -0.57
CLK3-204ENST00000483723 CACNG5Q9UF02 275 aa11.52□□□□□ -0.57
CLK3-204ENST00000483723 SAA2-SAA4A0A096LPE2 208 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 A0A1W2PPE3 182 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 F5H0A9 414 aaPredicted RBP11.51□□□□□ -0.57
CLK3-204ENST00000483723 HPRT1P00492 218 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 RNF224P0DH78 156 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 SAA2P0DJI9 122 aaPredicted RBP11.51□□□□□ -0.57
CLK3-204ENST00000483723 KIR2DS2P43631 304 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 THBS3P49746 956 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 AKR1C2P52895 323 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 PAX9P55771 341 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 ZNF816Q0VGE8 651 aaPredicted RBP11.51□□□□□ -0.57
CLK3-204ENST00000483723 IZUMO4Q1ZYL8 232 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 MIDNQ504T8 468 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 RAB39BQ96DA2 213 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 PHYHIPLQ96FC7 376 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 ADTRPQ96IZ2 230 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 SPOCK3Q9BQ16 436 aa11.51□□□□□ -0.57
CLK3-204ENST00000483723 ZNF471Q9BX82 626 aaPredicted RBP11.51□□□□□ -0.57
CLK3-204ENST00000483723 DOCK11Q5JSL3 2073 aa11.5□□□□□ -0.57
CLK3-204ENST00000483723 RELNP78509 3460 aa11.5□□□□□ -0.57
CLK3-204ENST00000483723 FAM90A26D6RGX4 464 aa11.5□□□□□ -0.57
CLK3-204ENST00000483723 SPDEFO95238 335 aa11.5□□□□□ -0.57
CLK3-204ENST00000483723 PVALBP20472 110 aaPredicted RBP11.5□□□□□ -0.57
CLK3-204ENST00000483723 EPHA1P21709 976 aa11.5□□□□□ -0.57
CLK3-204ENST00000483723 OR2B11Q5JQS5 317 aa11.5□□□□□ -0.57
CLK3-204ENST00000483723 WDR25Q64LD2 544 aaPredicted RBP11.5□□□□□ -0.57
CLK3-204ENST00000483723 OR8H3Q8N146 312 aa11.5□□□□□ -0.57
CLK3-204ENST00000483723 LYG1Q8N1E2 194 aa11.5□□□□□ -0.57
CLK3-204ENST00000483723 OR2C3Q8N628 320 aa11.5□□□□□ -0.57
CLK3-204ENST00000483723 LY6G5BQ8NDX9 201 aa11.5□□□□□ -0.57
CLK3-204ENST00000483723 RNASE11Q8TAA1 199 aaKnown RBP11.5□□□□□ -0.57
CLK3-204ENST00000483723 PRELID3BQ9Y3B1 194 aa11.5□□□□□ -0.57
CLK3-204ENST00000483723 LINC00862A6NCI5 91 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 TOR1AO14656 332 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 PPIHO43447 177 aaKnown RBP11.49□□□□□ -0.57
CLK3-204ENST00000483723 CHST1O43916 411 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 TMEM50AO95807 157 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 KRASP01116 189 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 G6PCP35575 357 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 CDKN1AP38936 164 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 ARHGDIBP52566 201 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 EFNA4P52798 201 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 TLE4Q04727 773 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 ALKAL2Q6UX46 152 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 ZNF833PQ6ZTB9 187 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 OR8B3Q8NGG8 313 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 OR8B2Q96RD0 313 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 S1PR3Q99500 378 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 PATZ1Q9HBE1 687 aaKnown RBP11.49□□□□□ -0.57
CLK3-204ENST00000483723 FAM90A9PA6NNJ1 464 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 J3QKU1 62 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 FCGR3BO75015 233 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 RBP4P02753 201 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 GAPDHP04406 335 aaKnown RBP11.49□□□□□ -0.57
CLK3-204ENST00000483723 IGHV1-8P0DP01 117 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 GNG10P50151 68 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 ZNF295-AS1Q8N0V1 137 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 ZNF383Q8NA42 475 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 BSCL2Q96G97 398 aaPredicted RBP11.49□□□□□ -0.57
CLK3-204ENST00000483723 RAB40CQ96S21 281 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 MAGT1Q9H0U3 335 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 LYRM2Q9NU23 88 aaPredicted RBP11.49□□□□□ -0.57
CLK3-204ENST00000483723 CFAP46Q8IYW2 2715 aa11.49□□□□□ -0.57
CLK3-204ENST00000483723 FAM24AA6NFZ4 105 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 J3QR06 171 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 SSSCA1O60232 199 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 CT45A6P0DMU7 189 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 CT45A5P0DMU8 189 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 CT45A7P0DMV0 189 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 TPT1P13693 172 aaKnown RBP11.48□□□□□ -0.57
CLK3-204ENST00000483723 AARDQ4LEZ3 155 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 BAP18Q8IXM2 172 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 TMEM252Q8N6L7 170 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 R3HDM4Q96D70 268 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.48□□□□□ -0.57
CLK3-204ENST00000483723 FBXL17Q9UF56 701 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 AUP1Q9Y679 476 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 SESN1Q9Y6P5 492 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 ARID1AO14497 2285 aa11.48□□□□□ -0.57
CLK3-204ENST00000483723 SYNGR2O43760 224 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 NDUFS7O75251 213 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 NMBP08949 121 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 ZNF137PP52743 207 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 TAS2R30P59541 319 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 RAB14P61106 215 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 VAMP2P63027 116 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 SRSF1Q07955 248 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLK3-204ENST00000483723 H2BFWTQ7Z2G1 175 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 OR9G1Q8NH87 305 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 ST6GALNAC6Q969X2 333 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 SMIM8Q96KF7 97 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 SLC25A31Q9H0C2 315 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 ARV1Q9H2C2 271 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 SLC25A32Q9H2D1 315 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 ZC4H2Q9NQZ6 224 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 HSPB7Q9UBY9 170 aa11.47□□□□□ -0.57
CLK3-204ENST00000483723 WSB1Q9Y6I7 421 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms