RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 ZNF329Q86UD4 541 aa14.16□□□□□ -0.14
HDAC6-225ENST00000483506 RNF152Q8N8N0 203 aa14.16□□□□□ -0.14
HDAC6-225ENST00000483506 OR4F17Q8NGA8 305 aa14.16□□□□□ -0.14
HDAC6-225ENST00000483506 RAB2BQ8WUD1 216 aa14.16□□□□□ -0.14
HDAC6-225ENST00000483506 DDB2Q92466 427 aa14.16□□□□□ -0.14
HDAC6-225ENST00000483506 ADTRPQ96IZ2 230 aa14.16□□□□□ -0.14
HDAC6-225ENST00000483506 OR4F4Q96R69 305 aa14.16□□□□□ -0.14
HDAC6-225ENST00000483506 RBM7Q9Y580 266 aaKnown RBP14.16□□□□□ -0.14
HDAC6-225ENST00000483506 IGLV2-14P01704 120 aa14.15□□□□□ -0.14
HDAC6-225ENST00000483506 NAT1P18440 290 aa14.15□□□□□ -0.14
HDAC6-225ENST00000483506 DUTP33316 252 aaKnown RBP14.15□□□□□ -0.14
HDAC6-225ENST00000483506 TMBIM6P55061 237 aa14.15□□□□□ -0.14
HDAC6-225ENST00000483506 ARPC4P59998 168 aa14.15□□□□□ -0.14
HDAC6-225ENST00000483506 MZT2AQ6P582 158 aa14.15□□□□□ -0.14
HDAC6-225ENST00000483506 FAM110DQ8TAY7 271 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-225ENST00000483506 FLYWCH2Q96CP2 140 aaKnown RBP14.15□□□□□ -0.14
HDAC6-225ENST00000483506 TSNAXQ99598 290 aaKnown RBP14.15□□□□□ -0.14
HDAC6-225ENST00000483506 OR51J1Q9H342 316 aa14.15□□□□□ -0.14
HDAC6-225ENST00000483506 SLC35D1Q9NTN3 355 aa14.15□□□□□ -0.14
HDAC6-225ENST00000483506 NECAP2Q9NVZ3 263 aa14.15□□□□□ -0.14
HDAC6-225ENST00000483506 PLXNB1O43157 2135 aa14.14□□□□□ -0.15
HDAC6-225ENST00000483506 IGKV1D-13A0A0B4J2D9 117 aa14.14□□□□□ -0.15
HDAC6-225ENST00000483506 IGKV1-13P0DP09 117 aa14.14□□□□□ -0.15
HDAC6-225ENST00000483506 RRASP10301 218 aa14.14□□□□□ -0.15
HDAC6-225ENST00000483506 ELK1P19419 428 aa14.14□□□□□ -0.15
HDAC6-225ENST00000483506 CRIP2P52943 208 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-225ENST00000483506 MSMO1Q15800 293 aa14.14□□□□□ -0.15
HDAC6-225ENST00000483506 TMEM177Q53S58 311 aa14.14□□□□□ -0.15
HDAC6-225ENST00000483506 TEX38Q6PEX7 206 aa14.14□□□□□ -0.15
HDAC6-225ENST00000483506 CLVS1Q8IUQ0 354 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-225ENST00000483506 OR5AP2Q8NGF4 316 aa14.14□□□□□ -0.15
HDAC6-225ENST00000483506 FBXL15Q9H469 300 aa14.14□□□□□ -0.15
HDAC6-225ENST00000483506 ZFP57Q9NU63 452 aa14.14□□□□□ -0.15
HDAC6-225ENST00000483506 RBMX2Q9Y388 322 aaKnown RBP14.14□□□□□ -0.15
HDAC6-225ENST00000483506 SMIM31A0A1B0GVY4 71 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 LINC00473A8K010 186 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 HPGDSO60760 199 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 IGLV2-23P01705 113 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 IGHG4P01861 327 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 OR5H8P0DN80 308 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 PRSS3P35030 304 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 LGALS7P47929 136 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 NDPQ00604 133 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 FOXE3Q13461 319 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 EIF4EBP1Q13541 118 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-225ENST00000483506 SPCS2Q15005 226 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 PSG5Q15238 335 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 RTL8BQ17RB0 113 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 ZNF660Q6AZW8 331 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-225ENST00000483506 OVCH2Q7RTZ1 564 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 GPX8Q8TED1 209 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 R3HDM4Q96D70 268 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 SCPEP1Q9HB40 452 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 IFT46Q9NQC8 304 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 ADAM30Q9UKF2 790 aa14.13□□□□□ -0.15
HDAC6-225ENST00000483506 MEIS3P1A6NDR6 274 aa14.12□□□□□ -0.15
HDAC6-225ENST00000483506 ATP6V0E1O15342 81 aa14.12□□□□□ -0.15
HDAC6-225ENST00000483506 TPPPO94811 219 aa14.12□□□□□ -0.15
HDAC6-225ENST00000483506 ELANEP08246 267 aa14.12□□□□□ -0.15
HDAC6-225ENST00000483506 VDAC1P21796 283 aa14.12□□□□□ -0.15
HDAC6-225ENST00000483506 PPIFP30405 207 aaKnown RBP14.12□□□□□ -0.15
HDAC6-225ENST00000483506 SLC6A1P30531 599 aa14.12□□□□□ -0.15
HDAC6-225ENST00000483506 FCGR2CP31995 323 aa14.12□□□□□ -0.15
HDAC6-225ENST00000483506 RPS16P62249 146 aaKnown RBP14.12□□□□□ -0.15
HDAC6-225ENST00000483506 RPL23AP62750 156 aaKnown RBP14.12□□□□□ -0.15
HDAC6-225ENST00000483506 CDK10Q15131 360 aa14.12□□□□□ -0.15
HDAC6-225ENST00000483506 C19orf54Q5BKX5 351 aa14.12□□□□□ -0.15
HDAC6-225ENST00000483506 GIMAP1Q8WWP7 306 aa14.12□□□□□ -0.15
HDAC6-225ENST00000483506 METTL1Q9UBP6 276 aaKnown RBP14.12□□□□□ -0.15
HDAC6-225ENST00000483506 A0A1W2PRX2 142 aa14.11□□□□□ -0.15
HDAC6-225ENST00000483506 FCN1O00602 326 aa14.11□□□□□ -0.15
HDAC6-225ENST00000483506 PPYP01298 95 aa14.11□□□□□ -0.15
HDAC6-225ENST00000483506 CRYGBP07316 175 aa14.11□□□□□ -0.15
HDAC6-225ENST00000483506 AADACP22760 399 aa14.11□□□□□ -0.15
HDAC6-225ENST00000483506 CX3CL1P78423 397 aa14.11□□□□□ -0.15
HDAC6-225ENST00000483506 CBX3Q13185 183 aa14.11□□□□□ -0.15
HDAC6-225ENST00000483506 BVESQ8NE79 360 aa14.11□□□□□ -0.15
HDAC6-225ENST00000483506 HSD17B10Q99714 261 aaKnown RBP14.11□□□□□ -0.15
HDAC6-225ENST00000483506 SULT1C2O00338 296 aa14.1□□□□□ -0.15
HDAC6-225ENST00000483506 PSMB8P28062 276 aa14.1□□□□□ -0.15
HDAC6-225ENST00000483506 TAS2R46P59540 309 aa14.1□□□□□ -0.15
HDAC6-225ENST00000483506 PLGLAQ15195 96 aa14.1□□□□□ -0.15
HDAC6-225ENST00000483506 DHRS11Q6UWP2 260 aa14.1□□□□□ -0.15
HDAC6-225ENST00000483506 ZNF562Q6V9R5 426 aa14.1□□□□□ -0.15
HDAC6-225ENST00000483506 MINDY2Q8NBR6 621 aa14.1□□□□□ -0.15
HDAC6-225ENST00000483506 OSR1Q8TAX0 266 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-225ENST00000483506 MYOZ3Q8TDC0 251 aa14.1□□□□□ -0.15
HDAC6-225ENST00000483506 HARBI1Q96MB7 349 aa14.1□□□□□ -0.15
HDAC6-225ENST00000483506 PARP11Q9NR21 331 aa14.1□□□□□ -0.15
HDAC6-225ENST00000483506 CCDC59Q9P031 241 aaKnown RBP14.1□□□□□ -0.15
HDAC6-225ENST00000483506 NOTCH3Q9UM47 2321 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 TRAV41A0A0B4J266 112 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 SRRM4A7MD48 611 aaKnown RBP14.09□□□□□ -0.15
HDAC6-225ENST00000483506 J3QRK9 145 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 SLC25A17O43808 307 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 IGLV1-40P01703 118 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 FCER2P06734 321 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 EGR2P11161 476 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-225ENST00000483506 DYRK1AQ13627 763 aa14.09□□□□□ -0.15
HDAC6-225ENST00000483506 CXorf66Q5JRM2 361 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms