RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 ALX4Q9H161 411 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-205ENST00000482968 C7orf69Q9H7B7 122 aa12.25□□□□□ -0.45
PHGDH-205ENST00000482968 UNKLQ9H9P5 680 aaKnown RBP12.25□□□□□ -0.45
PHGDH-205ENST00000482968 PIPOXQ9P0Z9 390 aa12.25□□□□□ -0.45
PHGDH-205ENST00000482968 MGAT4CQ9UBM8 478 aa12.25□□□□□ -0.45
PHGDH-205ENST00000482968 BAHCC1Q9P281 2608 aa12.25□□□□□ -0.45
PHGDH-205ENST00000482968 SAA2-SAA4A0A096LPE2 208 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 G3V3Q6 166 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 RNASEK-C17orf49H0YIS7 233 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 PROP1O75360 226 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 PGLYRP1O75594 196 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-205ENST00000482968 SAA2P0DJI9 122 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-205ENST00000482968 CTRB1P17538 263 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 VAMP1P23763 118 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 S100GP29377 79 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 TAS2R31P59538 309 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 PPP1R1AQ13522 171 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 CTRB2Q6GPI1 263 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 TMEM65Q6PI78 240 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 TBC1D26Q86UD7 250 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 LINC00311Q8N616 119 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 ZNF596Q8TC21 504 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 FAM216AQ8WUB2 273 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 LHX4Q969G2 390 aa12.24□□□□□ -0.45
PHGDH-205ENST00000482968 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.23□□□□□ -0.451e-7■□□□□ 8.7
PHGDH-205ENST00000482968 MPPED1O15442 326 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 MPC2O95563 127 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 IGLV1-47P01700 117 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 ARG1P05089 322 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 HOXB4P17483 251 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-205ENST00000482968 NUP62P37198 522 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-205ENST00000482968 LINC00205P59089 165 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 SGPP2Q8IWX5 399 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 CCDC71LQ8N9Z2 235 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 ZBTB34Q8NCN2 500 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 OR11H6Q8NGC7 330 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 NOTCH2Q04721 2471 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 CRYM-AS1A6NIL9 109 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 B3GALNT1O75752 331 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 OR2A4O95047 310 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 HLA-AP01891 365 aaKnown RBP12.23□□□□□ -0.45
PHGDH-205ENST00000482968 ZNF16P17020 682 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-205ENST00000482968 GATA3P23771 443 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 SUPT4H1P63272 117 aaKnown RBP12.23□□□□□ -0.45
PHGDH-205ENST00000482968 DHRS2Q13268 280 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 HLA-DRB5Q30154 266 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 SP6Q3SY56 376 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 NCR3LG1Q68D85 454 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 CYB5R2Q6BCY4 276 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 BEND2Q8NDZ0 799 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 OR51H1Q8NH63 302 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 SCARB1Q8WTV0 552 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 OR2A7Q96R45 310 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 ZNF251Q9BRH9 671 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 GAB2Q9UQC2 676 aa12.23□□□□□ -0.45
PHGDH-205ENST00000482968 SVEP1Q4LDE5 3571 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 ZNF469Q96JG9 3925 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-205ENST00000482968 C9orf170A2RU37 121 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 BUB1B-PAK6H3BSN5 160 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 M0R1X1 148 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 S100A11P31949 105 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 RND3P61587 244 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 DIAPH2-AS1Q14236 149 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 SLC9A3R2Q15599 337 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 ZNF626Q68DY1 528 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 OR4P4Q8NGL7 312 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 CASTOR1Q8WTX7 329 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 S1PR3Q99500 378 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 NAA60Q9H7X0 242 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 KCNIP3Q9Y2W7 256 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 ITPR3Q14573 2671 aa12.22□□□□□ -0.45
PHGDH-205ENST00000482968 C3orf85A0A1B0GTC6 90 aa12.21□□□□□ -0.45
PHGDH-205ENST00000482968 REG1BP48304 166 aa12.21□□□□□ -0.45
PHGDH-205ENST00000482968 UBE2MP61081 183 aaKnown RBP12.21□□□□□ -0.45
PHGDH-205ENST00000482968 RPL30P62888 115 aaKnown RBP12.21□□□□□ -0.45
PHGDH-205ENST00000482968 MSMO1Q15800 293 aa12.21□□□□□ -0.45
PHGDH-205ENST00000482968 LYG2Q86SG7 212 aa12.21□□□□□ -0.45
PHGDH-205ENST00000482968 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-205ENST00000482968 PRR13Q9NZ81 148 aa12.21□□□□□ -0.45
PHGDH-205ENST00000482968 ABCA1O95477 2261 aa12.21□□□□□ -0.45
PHGDH-205ENST00000482968 FLNBO75369 2602 aaKnown RBP12.21□□□□□ -0.46
PHGDH-205ENST00000482968 CENPVL3A0A0U1RRI6 287 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 LINC00473A8K010 186 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 SFT2D2O95562 160 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 AVPP01185 164 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 OR5AC1P0C628 307 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 ATF4P18848 351 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-205ENST00000482968 F2RP25116 425 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 UBE2E1P51965 193 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 EIF4EBP1Q13541 118 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-205ENST00000482968 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-205ENST00000482968 ST6GALNAC6Q969X2 333 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 TP53RKQ96S44 253 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 HSD17B10Q99714 261 aaKnown RBP12.2□□□□□ -0.46
PHGDH-205ENST00000482968 AKAP9Q99996 3911 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 IGHV3OR16-10A0A075B7F0 116 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 MFSD2BA6NFX1 497 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 ODF3BA8MYP8 253 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 IFNA2P01563 188 aa12.2□□□□□ -0.46
PHGDH-205ENST00000482968 IL3RAP26951 378 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms