RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	RNF212B	A8MTL3	300 aa		12.33	□□□□□ -0.44
CCM2-215	ENST00000482714	HOXA3	O43365	443 aa	Predicted RBP	12.33	□□□□□ -0.44
CCM2-215	ENST00000482714	CATR1	Q13166	79 aa		12.33	□□□□□ -0.44
CCM2-215	ENST00000482714	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.33	□□□□□ -0.44
CCM2-215	ENST00000482714	C16orf82	Q7Z2V1	217 aa		12.33	□□□□□ -0.44
CCM2-215	ENST00000482714	OR8H1	Q8NGG4	311 aa		12.33	□□□□□ -0.44
CCM2-215	ENST00000482714	OR13C8	Q8NGS7	320 aa		12.33	□□□□□ -0.44
CCM2-215	ENST00000482714	OR2T10	Q8NGZ9	312 aa		12.33	□□□□□ -0.44
CCM2-215	ENST00000482714	FAM212B	Q9NTI7	297 aa	Predicted RBP	12.33	□□□□□ -0.44
CCM2-215	ENST00000482714	TCF19	Q9Y242	345 aa		12.33	□□□□□ -0.44
CCM2-215	ENST00000482714	MDFIC2	A0A1B0GVS7	189 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714		H3BUX3	64 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	PLA2G10	O15496	165 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	MOS	P00540	346 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	APOA2	P02652	100 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	CTSD	P07339	412 aa	Predicted RBP	12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	KIR2DS2	P43631	304 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	RND3	P61587	244 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	SLC9A3R2	Q15599	337 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	FAAP20	Q6NZ36	180 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	MZT2B	Q6NZ67	158 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	ZNF818P	Q6ZRF7	136 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	PDPN	Q86YL7	162 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	ZNF383	Q8NA42	475 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	CD300LF	Q8TDQ1	290 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	ZFAND2B	Q8WV99	257 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	CAPSL	Q8WWF8	208 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	MRPL20	Q9BYC9	149 aa	Known RBP	12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	VPREB3	Q9UKI3	123 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714	WASHC3	Q9Y3C0	194 aa		12.32	□□□□□ -0.44
CCM2-215	ENST00000482714		H0YJW9	148 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	LYRM1	O43325	122 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	PGLYRP1	O75594	196 aa	Predicted RBP	12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	B3GALNT1	O75752	331 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	VENTX	O95231	258 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	IGHV4-59	P01825	116 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	PGAM2	P15259	253 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	LGALS7	P47929	136 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	CBX3	Q13185	183 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	DHRS7B	Q6IAN0	325 aa	Predicted RBP	12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	C16orf87	Q6PH81	154 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	KCTD9	Q7L273	389 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	ZDHHC22	Q8N966	263 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	CCDC71L	Q8N9Z2	235 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	DDB2	Q92466	427 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	FXYD6	Q9H0Q3	95 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	PALMD	Q9NP74	551 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714	C1RL	Q9NZP8	487 aa		12.31	□□□□□ -0.44
CCM2-215	ENST00000482714		A6NDX4	124 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	TRIM77	I1YAP6	450 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714		M0QZK8	103 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.3	□□□□□ -0.44	6e-11	■■■■■ 38.6
CCM2-215	ENST00000482714	RNASE1	P07998	156 aa	Known RBP	12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	SNRNP70	P08621	437 aa	Known RBP	12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	DEFA1	P59665	94 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	DEFA3	P59666	94 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	ASAH1	Q13510	395 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	RBMS2	Q15434	407 aa	Known RBP	12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	RTL8B	Q17RB0	113 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	ABCA11P	Q4W5N1	156 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	POC5	Q8NA72	575 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	OR4C13	Q8NGP0	309 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	MARCH1	Q8TCQ1	289 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	MRGPRF	Q96AM1	343 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	FLYWCH2	Q96CP2	140 aa	Known RBP	12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	EAF1	Q96JC9	268 aa	Predicted RBP	12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	RBM14	Q96PK6	669 aa	Known RBP	12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	AIFM2	Q9BRQ8	373 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	COPZ2	Q9P299	210 aa		12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	C14orf166	Q9Y224	244 aa	Known RBP	12.3	□□□□□ -0.44
CCM2-215	ENST00000482714	OR2F2	O95006	317 aa		12.29	□□□□□ -0.44
CCM2-215	ENST00000482714	IGKV1D-33	P01593	117 aa		12.29	□□□□□ -0.44
CCM2-215	ENST00000482714	IGKV1-33	P01594	117 aa		12.29	□□□□□ -0.44
CCM2-215	ENST00000482714	PAX6	P26367	422 aa		12.29	□□□□□ -0.44
CCM2-215	ENST00000482714	C11orf88	Q6PI97	169 aa		12.29	□□□□□ -0.44
CCM2-215	ENST00000482714		Q8N6K4	173 aa		12.29	□□□□□ -0.44
CCM2-215	ENST00000482714	DRAXIN	Q8NBI3	349 aa	Predicted RBP	12.29	□□□□□ -0.44
CCM2-215	ENST00000482714	C5orf30	Q96GV9	206 aa		12.29	□□□□□ -0.44
CCM2-215	ENST00000482714	SLC2A9	Q9NRM0	540 aa		12.29	□□□□□ -0.44
CCM2-215	ENST00000482714	SLC35D1	Q9NTN3	355 aa		12.29	□□□□□ -0.44
CCM2-215	ENST00000482714	LINC00854	A0A1B0GVQ3	168 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	DNAJC9-AS1	A6NH13	148 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	LINC00473	A8K010	186 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714		H7C2Y5	167 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	MPPED1	O15442	326 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	F2R	P25116	425 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	SLC6A1	P30531	599 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	PIGP	P57054	158 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	RPL30	P62888	115 aa	Known RBP	12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	HES1	Q14469	280 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	TMEM177	Q53S58	311 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	OSR1	Q8TAX0	266 aa	Predicted RBP	12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	TCTEX1D2	Q8WW35	142 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	RTBDN	Q9BSG5	229 aa	Predicted RBP	12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	KCNIP3	Q9Y2W7	256 aa		12.28	□□□□□ -0.44
CCM2-215	ENST00000482714	IGHV3-72	A0A0B4J1Y9	119 aa		12.27	□□□□□ -0.44
CCM2-215	ENST00000482714	PIGBOS1	A0A0B4J2F0	54 aa		12.27	□□□□□ -0.44
CCM2-215	ENST00000482714	FGF16	O43320	207 aa		12.27	□□□□□ -0.44
CCM2-215	ENST00000482714	NDUFB6	O95139	128 aa		12.27	□□□□□ -0.44
CCM2-215	ENST00000482714	TMEM11	P17152	192 aa		12.27	□□□□□ -0.44

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