RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 Q6ZR03 302 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 ARPINQ7Z6K5 226 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 LRRC28Q86X40 367 aaPredicted RBP5.16□□□□□ -1.58
CLK1-212ENST00000482590 CALHM3Q86XJ0 350 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 MTURNQ8N3F0 131 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 ZNF383Q8NA42 475 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 OR10AD1Q8NGE0 317 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 OR8B3Q8NGG8 313 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 OR5L1Q8NGL2 311 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 ZNF420Q8TAQ5 688 aaPredicted RBP5.16□□□□□ -1.58
CLK1-212ENST00000482590 DYNC2LI1Q8TCX1 351 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 C10orf82Q8WW14 230 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 PYDC1Q8WXC3 89 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 OR8B4Q96RC9 309 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 OR8B2Q96RD0 313 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 PPDPFQ9H3Y8 114 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 RERGLQ9H628 205 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 IFT46Q9NQC8 304 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 GID8Q9NWU2 228 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 KLHL21Q9UJP4 597 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 SPATA2Q9UM82 520 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 NOTCH1P46531 2555 aa5.16□□□□□ -1.58
CLK1-212ENST00000482590 OR6C6A6NF89 314 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 SLC16A7O60669 478 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 NDUFB2O95178 105 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 ZNF682O95780 498 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 CYB5R3P00387 301 aaPredicted RBP5.15□□□□□ -1.59
CLK1-212ENST00000482590 CRYBA1P05813 215 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 CD14P08571 375 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 GNAO1P09471 354 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 C8orf88P0DMB2 117 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 IGHV4-38-2P0DP08 117 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 CTLA4P16410 223 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 IGFBP3P17936 291 aaPredicted RBP5.15□□□□□ -1.59
CLK1-212ENST00000482590 SERPINA2P20848 420 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 TGFBR2P37173 567 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 ERFP50548 548 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 CAV2P51636 162 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 DEFA6Q01524 100 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 AESQ08117 197 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 SLC9A3R2Q15599 337 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 OR2T2Q6IF00 324 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 CCDC121Q6ZUS5 278 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 ACOT7LQ6ZUV0 252 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 MBOAT2Q6ZWT7 520 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 SMIM15Q7Z3B0 74 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 FAM19A1Q7Z5A9 133 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 CALHM1Q8IU99 346 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 VKORC1L1Q8N0U8 176 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 DUSP18Q8NEJ0 188 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 CCDC54Q8NEL0 328 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 OR2T33Q8NG76 320 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 OR13G1Q8NGZ3 307 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 ZNF502Q8TBZ5 544 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 TCTEX1D2Q8WW35 142 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 SLC7A6Q92536 515 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 APOBEC3DQ96AK3 386 aaPredicted RBP5.15□□□□□ -1.59
CLK1-212ENST00000482590 C2orf48Q96LS8 159 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 Q96M85 177 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 C1orf147Q96MC9 270 aaPredicted RBP5.15□□□□□ -1.59
CLK1-212ENST00000482590 MRPS26Q9BYN8 205 aaKnown RBP5.15□□□□□ -1.59
CLK1-212ENST00000482590 PLEKHA3Q9HB20 300 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 VNN3Q9NY84 501 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 RPL36Q9Y3U8 105 aaKnown RBP5.15□□□□□ -1.59
CLK1-212ENST00000482590 VWFP04275 2813 aa5.15□□□□□ -1.59
CLK1-212ENST00000482590 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.14□□□□□ -1.59
CLK1-212ENST00000482590 KIR2DL5BA0A0G2JN68 375 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 KIR2DL5BA0A0G2JPC4 375 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 TMEM272A0A1B0GTI8 110 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 MDFIC2A0A1B0GVS7 189 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 A0A1B0GW55 424 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 PHYHO14832 338 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 ENSAO43768 121 aaKnown RBP5.14□□□□□ -1.59
CLK1-212ENST00000482590 WNT2P09544 360 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 FRMD6-AS1P0C7T7 363 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 DUX4L2P0CJ85 424 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 DUX4L3P0CJ86 424 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 DUX4L4P0CJ87 422 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 DUX4L5P0CJ88 424 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 DUX4L6P0CJ89 424 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 DUX4L7P0CJ90 424 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 SLC2A2P11168 524 aaPredicted RBP5.14□□□□□ -1.59
CLK1-212ENST00000482590 SELEP16581 610 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 M6PRP20645 277 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 ATP6V1B2P21281 511 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 MDKP21741 143 aaPredicted RBP5.14□□□□□ -1.59
CLK1-212ENST00000482590 RBMXP38159 391 aaKnown RBP5.14□□□□□ -1.59
CLK1-212ENST00000482590 OR10A3P58181 314 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 PAX8Q06710 450 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 ZNF181Q2M3W8 571 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 ZNF404Q494X3 552 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 ZBED5Q49AG3 693 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 ACSM3Q53FZ2 586 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 VAX1Q5SQQ9 334 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 OTPQ5XKR4 325 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 DUX4L9Q6RFH8 374 aaPredicted RBP5.14□□□□□ -1.59
CLK1-212ENST00000482590 FBXW12Q6X9E4 464 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 BRD3OSQ6XYD6 125 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 KIR2DL5AQ8N109 375 aa5.14□□□□□ -1.59
CLK1-212ENST00000482590 OR8G5Q8NG78 346 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms