RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 FCGR2CP31995 323 aa12.92□□□□□ -0.34
CCDC78-212ENST00000482152 RTL8BQ17RB0 113 aa12.92□□□□□ -0.34
CCDC78-212ENST00000482152 DHRS11Q6UWP2 260 aa12.92□□□□□ -0.34
CCDC78-212ENST00000482152 GLDNQ6ZMI3 551 aaPredicted RBP12.92□□□□□ -0.34
CCDC78-212ENST00000482152 OVCH2Q7RTZ1 564 aa12.92□□□□□ -0.34
CCDC78-212ENST00000482152 ZBTB34Q8NCN2 500 aa12.92□□□□□ -0.34
CCDC78-212ENST00000482152 HSD17B10Q99714 261 aaKnown RBP12.92□□□□□ -0.34
CCDC78-212ENST00000482152 SLC35D1Q9NTN3 355 aa12.92□□□□□ -0.34
CCDC78-212ENST00000482152 PRELID3BQ9Y3B1 194 aa12.92□□□□□ -0.34
CCDC78-212ENST00000482152 CEPT1Q9Y6K0 416 aa12.92□□□□□ -0.34
CCDC78-212ENST00000482152 PSMB11A5LHX3 300 aa12.91□□□□□ -0.34
CCDC78-212ENST00000482152 SH2D7A6NKC9 451 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-212ENST00000482152 ZNF701M0R085 212 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-212ENST00000482152 RGS5O15539 181 aa12.91□□□□□ -0.34
CCDC78-212ENST00000482152 IGF1P05019 195 aa12.91□□□□□ -0.34
CCDC78-212ENST00000482152 DUTP33316 252 aaKnown RBP12.91□□□□□ -0.34
CCDC78-212ENST00000482152 RPS16P62249 146 aaKnown RBP12.91□□□□□ -0.34
CCDC78-212ENST00000482152 CD83Q01151 205 aa12.91□□□□□ -0.34
CCDC78-212ENST00000482152 DYRK1AQ13627 763 aa12.91□□□□□ -0.34
CCDC78-212ENST00000482152 TMEM95Q3KNT9 176 aa12.91□□□□□ -0.34
CCDC78-212ENST00000482152 STPG2Q8N412 459 aa12.91□□□□□ -0.34
CCDC78-212ENST00000482152 RITA1Q96K30 269 aa12.91□□□□□ -0.34
CCDC78-212ENST00000482152 EXTL2Q9UBQ6 330 aa12.91□□□□□ -0.34
CCDC78-212ENST00000482152 ZNF107Q9UII5 783 aaPredicted RBP12.91□□□□□ -0.34
CCDC78-212ENST00000482152 RBMX2Q9Y388 322 aaKnown RBP12.91□□□□□ -0.34
CCDC78-212ENST00000482152 PPYP01298 95 aa12.9□□□□□ -0.34
CCDC78-212ENST00000482152 CSF1P09603 554 aa12.9□□□□□ -0.34
CCDC78-212ENST00000482152 CD28P10747 220 aa12.9□□□□□ -0.34
CCDC78-212ENST00000482152 RCVRNP35243 200 aa12.9□□□□□ -0.34
CCDC78-212ENST00000482152 MRPS10P82664 201 aaKnown RBP12.9□□□□□ -0.34
CCDC78-212ENST00000482152 ZNF660Q6AZW8 331 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-212ENST00000482152 ZNF66Q6ZN08 573 aa12.9□□□□□ -0.34
CCDC78-212ENST00000482152 SNX29P2Q8IUI4 249 aa12.9□□□□□ -0.34
CCDC78-212ENST00000482152 OR5H2Q8NGV7 314 aa12.9□□□□□ -0.34
CCDC78-212ENST00000482152 DDB2Q92466 427 aa12.9□□□□□ -0.34
CCDC78-212ENST00000482152 MMP27Q9H306 513 aa12.9□□□□□ -0.34
CCDC78-212ENST00000482152 MEIS3P1A6NDR6 274 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 IGKV1-16P04430 117 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 AADACP22760 399 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 PLGLAQ15195 96 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 PSG5Q15238 335 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 TMEM177Q53S58 311 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 ACTBL2Q562R1 376 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 TEX38Q6PEX7 206 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 TREML4Q6UXN2 200 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 LYSMD2Q8IV50 215 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 OR6F1Q8NGZ6 308 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 OSR1Q8TAX0 266 aaPredicted RBP12.89□□□□□ -0.35
CCDC78-212ENST00000482152 ZFP57Q9NU63 452 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 EHFQ9NZC4 300 aa12.89□□□□□ -0.35
CCDC78-212ENST00000482152 TSSC4Q9Y5U2 329 aaPredicted RBP12.89□□□□□ -0.35
CCDC78-212ENST00000482152 IGKV1D-13A0A0B4J2D9 117 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 TCRBV4S1A1TA0A5B7 111 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 CCDC160A6NGH7 325 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 J3QRK9 145 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 CTDSP2O14595 271 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 IGLV2-14P01704 120 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 IGKV1-13P0DP09 117 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 VDAC1P21796 283 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 CNTFRP26992 372 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 RFX2P48378 723 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 LINC00205P59089 165 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 SSBP1Q04837 148 aaKnown RBP12.88□□□□□ -0.35
CCDC78-212ENST00000482152 ZNF562Q6V9R5 426 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 C11orf44Q8N8P7 122 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 BVESQ8NE79 360 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 FCAMRQ8WWV6 532 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 C5orf30Q96GV9 206 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 NOL4LQ96MY1 436 aaPredicted RBP12.88□□□□□ -0.35
CCDC78-212ENST00000482152 CITED2Q99967 270 aaPredicted RBP12.88□□□□□ -0.35
CCDC78-212ENST00000482152 HSPB9Q9BQS6 159 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 SLIRPQ9GZT3 109 aaKnown RBP12.88□□□□□ -0.35
CCDC78-212ENST00000482152 MIXL1Q9H2W2 232 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 OR51J1Q9H342 316 aa12.88□□□□□ -0.35
CCDC78-212ENST00000482152 METTL1Q9UBP6 276 aaKnown RBP12.88□□□□□ -0.35
CCDC78-212ENST00000482152 RSL24D1Q9UHA3 163 aaKnown RBP12.88□□□□□ -0.35
CCDC78-212ENST00000482152 IGHV7-81A0A0B4J1V7 117 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 LINC01548A6NM66 108 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 SHOXO15266 292 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 PMP2P02689 132 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 TBPP20226 339 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 SLC6A1P30531 599 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 KIR2DS2P43631 304 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 HERV-K104P61576 105 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 PYHIN1Q6K0P9 492 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 LPCAT3Q6P1A2 487 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 KCTD9Q7L273 389 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 MFSD4AQ8N468 514 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 TEX45Q8NA69 505 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 OR4F17Q8NGA8 305 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 SECTM1Q8WVN6 248 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 OR4F4Q96R69 305 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 AIFM2Q9BRQ8 373 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 SLC5A7Q9GZV3 580 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 NXF2Q9GZY0 626 aaKnown RBP12.87□□□□□ -0.35
CCDC78-212ENST00000482152 FBXL15Q9H469 300 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 NDUFA13Q9P0J0 144 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 A3GALT2U3KPV4 340 aa12.87□□□□□ -0.35
CCDC78-212ENST00000482152 LINC00473A8K010 186 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 GABARAPH6UMI1 98 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms